Factsheet for HORVU5Hr1G033110.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU5Hr1G033110.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G60440.1	HORVU5Hr1G033110.2	AT1G60440.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G081790.31	Barley	peroxisome	77.8	48.87
GSMUA_Achr6P09090_001	Banana	cytosol	38.12	36.56
AT1G60440.1	Thale cress	cytosol	28.03	32.64
VIT_01s0127g00490.t01	Wine grape	cytosol	30.04	31.98
PGSC0003DMT400035152	Potato	cytosol	28.92	30.28
Solyc05g005250.2.1	Tomato	cytosol	28.92	30.28
KRG99350	Soybean	cytosol	28.03	30.27
KRH45653	Soybean	cytosol	28.25	29.37
CDY40427	Canola	cytosol	18.16	27.18
CDY47225	Canola	cytosol	29.37	22.55
Bra027158.1-P	Field mustard	cytosol	29.37	22.51
CDY53055	Canola	cytosol	29.37	22.51
HORVU7Hr1G035030.7	Barley	cytosol, mitochondrion, plastid	23.77	15.63
HORVU3Hr1G078450.1	Barley	cytosol	1.35	6.82
HORVU3Hr1G078460.1	Barley	mitochondrion	2.02	6.38

Protein Annotations

KEGG:00770+2.7.1.33	Gene3D:1.20.1700.10	Gene3D:3.30.420.40	MapMan:7.4.2	UniProt:A0A287QTP1	InterPro:AF1104-like_sf
InterPro:At2g17340_3_helix_bundle	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004594
GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015937	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	EnsemblPlantsGene:HORVU5Hr1G033110
EnsemblPlants:HORVU5Hr1G033110.2	InterPro:IPR035073	PFAM:PF03630	PANTHER:PTHR12280	PANTHER:PTHR12280:SF34	SUPFAM:SSF111321
SUPFAM:SSF53067	InterPro:Type_II_PanK	UniParc:UPI000B47D01B	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr5H:-:219984910..219990440

Molecular Weight (calculated)

43069.2 Da

IEP (calculated)

5.424

GRAVY (calculated)

-0.160

Length

446 amino acids

Sequence
(BLAST)

001: IVVDGHGKFQ RVSGTNVGGG TYWGLGRLMT ECKSFDELLE LSQRGDNSTI DMLVGDIYGG LDYSKIGLSA STIASSFGKT ISDNKELSDY RPEDISLSLL
101: RMISYNIGQI SYLNALRYGL KRIFFGGFFI RGHAYTMDTI SFAVHFWSKG EAKAMFLRQX XXXXXXXXXX XXXXXXXXXX XXXHLVERFP MGAPYVGGKI
201: HGPPLGDLNE KISWMEKFVQ KGTQITAPVP MGAPATTGMG GFERPTSKGD ILRSDASAAL NVGVLHLVPS LDVFPLLEDP KTYEPNTIDL DHDEFKYWFT
301: ILSDHLPDLV EKAVASEGGT DDAKRRGDAF AHAFSAHLAR LTEEPAAYGK FGLANLLELR EECLREXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
401: FNEPSIETSM TKETSYTFDI CGAWHFLDRI NLSLIDFNTS FRNFMS

Best Arabidopsis Sequence Match ( AT1G60440.2 )
(BLAST)

001: MVWYIIPKAT GGGAFKFADL FKEKLGILFD KEDEMCSLVG GVNFLLKTVP REAFTYLDGQ KKFVEIDHND LYPYLLVNIG SGVSMIKVDG DGKYERISGT
101: SLGGGTFLGL GKLLTKCKSF DELLELSHHG NNRVIDMLVG DIYGGTDYSK IGLSSTAIAS SFGKAISDGK ELEDYQPEDV ARSLLRMISN NIGQIAYLNA
201: LRFGLKRIFF GGFFIRGLEY TMDTISVAVH FWSRGEAKAM FLRHEGFLGA LGAFTSYNDQ SHNDLKPHHH TVQRAILNCS GHNFRHIPVT SNLNESETIE
301: CSINLV

Arabidopsis Description

PANK1Pantothenate kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:O80765]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.