Factsheet for Bra027158.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra027158.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G60440.1	Bra027158.1-P	AT1G60440.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53055	Canola	cytosol	98.11	98.11
AT1G60440.1	Thale cress	cytosol	52.41	79.63
VIT_01s0127g00490.t01	Wine grape	cytosol	44.5	61.81
PGSC0003DMT400035152	Potato	cytosol	43.47	59.39
Solyc05g005250.2.1	Tomato	cytosol	42.78	58.45
KRG99350	Soybean	cytosol	41.41	58.35
KRH45653	Soybean	cytosol	40.21	54.55
GSMUA_Achr6P09090_001	Banana	cytosol	39.86	49.89
TraesCS7D01G167900.1	Wheat	cytosol	33.16	29.51
TraesCS7A01G167300.1	Wheat	cytosol	33.16	29.51
HORVU5Hr1G033110.2	Barley	cytosol	22.51	29.37
TraesCS7B01G071900.3	Wheat	cytosol	32.99	29.36
Zm00001d044985_P006	Maize	cytosol, extracellular	32.99	29.27
KXG19566	Sorghum	cytosol	33.33	29.26
Bra011327.1-P	Field mustard	cytosol	45.7	29.23
Bra040069.1-P	Field mustard	cytosol	44.67	28.92
Os06t0207000-01	Rice	cytosol	32.3	28.23
Bra011609.1-P	Field mustard	cytosol	9.28	14.71
Bra009651.1-P	Field mustard	cytosol	9.11	14.68

Protein Annotations

KEGG:00770+2.7.1.33	Gene3D:1.10.1760.10	Gene3D:1.10.8.780	MapMan:20.2.2.1.5	Gene3D:3.30.420.40	Gene3D:3.30.420.510
MapMan:7.4.2	InterPro:ARPC3	InterPro:ARPC3_sf	EnsemblPlantsGene:Bra027158	EnsemblPlants:Bra027158.1	EnsemblPlants:Bra027158.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004594	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005885	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015937	GO:GO:0016043
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0030833	GO:GO:0034314	InterPro:IPR036753
UniProt:M4EEE6	PFAM:PF03630	PFAM:PF04062	PANTHER:PTHR12280	PANTHER:PTHR12280:SF44	SUPFAM:SSF53067
SUPFAM:SSF69060	TIGRFAMs:TIGR00555	InterPro:Type_II_PanK	UniParc:UPI0002542739	SEG:seg	:

Description

AT1G60440 (E=4e-164) ATCOAA, ATPANK1 | ATPANK1 (PANTOTHENATE KINASE 1); pantothenate kinase

Coordinates

chrA09:+:8853669..8857805

Molecular Weight (calculated)

64499.2 Da

IEP (calculated)

6.945

GRAVY (calculated)

-0.146

Length

582 amino acids

Sequence
(BLAST)

001: MDPKDSRFST QISHLALDIG GTLIKLVYFS PNGDNCEDGS IVVGNNGCSA VQGRLCFAKF ETRKIDDCLD FIRLNILQHS GVQHPNGTER DKLSVKATGG
101: GAFKFADLFK EKLGIVFDKE DEMHSLVCGV NFLLKTVPRE AFTYLDGQKE FVQIDHNDLY PYLLVNIGSG VSMIKVDGDG KYERISGTSL GGGTFLGLGK
201: LLTKCKSFDE LLELSHQGNN RVIDMLVGDI YGGTDYSKIG LSSTAIASSF GKAISDGKEL EDYQPEDVAR SLLRMISNNI GQIAYLNALR FGLKRIFFGG
301: FFIRGLEYTM DTISVAVHFW SRGEAKAMFL RHEGFLGALG AFTSYKDQSH STDLKPHHHT VERAVLKCSD DDSFRHTPVT ANVNDGEAIE FRRLETTVAT
401: SPRTLHRNQV YHSSFVEEDG ITKACGCPLL PLKSHIKGPA PVSEQDRTDI VDEAITFFRA NVFFTNFPIK SPADKLLIYL TFYINVALKR LEGCRTLAVG
501: TKAIINLGLE DIPVPGEAGF PFPGLFSLPS SQEEADLFRN YLKQVREETS GRLLSVAYRA NGTPNKWWLA FAKRKFINVV LL

Best Arabidopsis Sequence Match ( AT1G60440.1 )
(BLAST)

001: MDPTQISHLA LDIGGTLIKL VYFSANGDYS EESRNGCSVV KGRLCFAKFE TRKIDDCLEF IRFNILHHSG VQQPNGEGHD KLYVKATGGG AFKFADLFKE
101: KLGILFDKED EMCSLVGGVN FLLKTVPREA FTYLDGQKKF VEIDHNDLYP YLLVNIGSGV SMIKVDGDGK YERISGTSLG GGTFLGLGKL LTKCKSFDEL
201: LELSHHGNNR VIDMLVGDIY GGTDYSKIGL SSTAIASSFG KAISDGKELE DYQPEDVARS LLRMISNNIG QIAYLNALRF GLKRIFFGGF FIRGLEYTMD
301: TISVAVHFWS RGEAKAMFLR HEGFLGALGA FTSYNDQSHN DLKPHHHTVQ RAILNCSGHN FRHIPVTSNL NESETIECSI NLV

Arabidopsis Description

PANK1Pantothenate kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:O80765]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.