Factsheet for Zm00001d044985_P006

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d044985_P006

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G60440.1	Zm00001d044985_P006	AT1G60440.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG19566	Sorghum	cytosol	93.9	92.91
TraesCS7A01G167300.1	Wheat	cytosol	83.69	83.94
TraesCS7B01G071900.3	Wheat	cytosol	83.54	83.79
TraesCS7D01G167900.1	Wheat	cytosol	82.93	83.18
Os06t0207000-01	Rice	cytosol	82.77	81.53
HORVU7Hr1G035030.7	Barley	cytosol, mitochondrion, plastid	79.12	76.55
GSMUA_Achr9P27330_001	Banana	cytosol	69.21	69.0
CDY40427	Canola	cytosol	20.43	44.97
AT1G60440.1	Thale cress	cytosol	25.91	44.39
VIT_01s0127g00490.t01	Wine grape	cytosol	27.74	43.44
KRG99350	Soybean	cytosol	26.37	41.89
PGSC0003DMT400035152	Potato	cytosol	25.0	38.5
KRH45653	Soybean	cytosol	25.0	38.23
Solyc05g005250.2.1	Tomato	cytosol	24.7	38.03
CDY47225	Canola	cytosol	29.27	33.05
Bra027158.1-P	Field mustard	cytosol	29.27	32.99
CDY53055	Canola	cytosol	29.27	32.99
Zm00001d021297_P008	Maize	cytosol	35.67	25.91
Zm00001d045911_P002	Maize	cytosol, plastid	7.93	12.65

Protein Annotations

KEGG:00770+2.7.1.33	Gene3D:1.10.8.780	EntrezGene:100280926	Gene3D:3.30.420.40	Gene3D:3.30.420.510	MapMan:7.4.2
ProteinID:AQL01255.1	ProteinID:AQL01263.1	ProteinID:AQL01266.1	UniProt:B6SPI3	ncoils:Coil	EMBL:EU954648
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004594	GO:GO:0005488	GO:GO:0005524
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015937
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	PFAM:PF03630	PANTHER:PTHR12280	PANTHER:PTHR12280:SF29
SUPFAM:SSF53067	TIGRFAMs:TIGR00555	InterPro:Type_II_PanK	UniParc:UPI000182AF8A	EnsemblPlantsGene:Zm00001d044985	EnsemblPlants:Zm00001d044985_P006
EnsemblPlants:Zm00001d044985_T006	:	:	:	:	:

Description

Pantothenate kinase family protein

Coordinates

chr9:+:9326915..9339646

Molecular Weight (calculated)

70880.7 Da

IEP (calculated)

5.671

GRAVY (calculated)

-0.069

Length

656 amino acids

Sequence
(BLAST)

001: MAEATGHGGR VVDLSGAEIR GDLEDRNPPI FLPRQPAASP LLALDIGGTL IKLVYTASRG GGADGTDLRF AKFERRRLQE CFNFIRAEGL LASNAGGEGV
101: TLKATGGGAY KFADDFLEKL GVCLDKLDEM DSVVSGANFL LQSIPGAAFT HMNGLRNPVD VSPNNLFPYL LVNIGSGVSI LKVTGNRKFE RVTGTHIGGG
201: TMFGLAKLLT GCKSYDEFLQ LSQKGDNFVL DLIVKDICGE LVCQKQGLST STLASSFGKV ITSKKKLTDY KPEDLASTLL SAFTYNIAQI AFLVASLLGL
301: RRVFFGGSYI RGHKSTMENI SYAIDFWSQS QMQAVFLRHE GYLGALGALM SYGDPSGENL TLEEKEPHHE SAPVDGTSAD EESDSNIFPY LLVNIGSGVS
401: MIEVIGKGKF ERIIGSHLGG GTILGLARLL TGCSSYEEFL ELSQRGNNLS VDLTVGDIYG EEGYPKIGLP ASTTAASFGK VNSSKLSEYK VEDLAAALLN
501: SFTYNIGQIA YFVANLSGLK RIFFRGAYVC GHEKTMDKIS RSLKYWSKGE VQTTFLCHEG FLGTLGAFWS YENMGIDSLA AHEVIREVLL GAPYTGQFPS
601: LPVTQQQENG EHGTLEGEVE SLRHDNALLK AEVERLQKEN ALLRAKLVRS GETSTL

Best Arabidopsis Sequence Match ( AT1G60440.1 )
(BLAST)

001: MDPTQISHLA LDIGGTLIKL VYFSANGDYS EESRNGCSVV KGRLCFAKFE TRKIDDCLEF IRFNILHHSG VQQPNGEGHD KLYVKATGGG AFKFADLFKE
101: KLGILFDKED EMCSLVGGVN FLLKTVPREA FTYLDGQKKF VEIDHNDLYP YLLVNIGSGV SMIKVDGDGK YERISGTSLG GGTFLGLGKL LTKCKSFDEL
201: LELSHHGNNR VIDMLVGDIY GGTDYSKIGL SSTAIASSFG KAISDGKELE DYQPEDVARS LLRMISNNIG QIAYLNALRF GLKRIFFGGF FIRGLEYTMD
301: TISVAVHFWS RGEAKAMFLR HEGFLGALGA FTSYNDQSHN DLKPHHHTVQ RAILNCSGHN FRHIPVTSNL NESETIECSI NLV

Arabidopsis Description

PANK1Pantothenate kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:O80765]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.