Factsheet for Zm00001d045911_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88334	Sorghum	cytosol, plastid	87.35	98.36
Os06t0325500-01	Rice	extracellular, plasma membrane	83.45	93.97
TraesCS7D01G228000.1	Wheat	golgi, unclear	82.24	92.6
TraesCS7A01G226400.1	Wheat	cytosol, plastid	82.0	92.33
TraesCS7B01G193200.1	Wheat	cytosol, plastid	81.75	92.05
GSMUA_Achr9P12370_001	Banana	cytosol	76.89	85.87
KRH38729	Soybean	cytosol, nucleus	71.78	80.38
VIT_03s0038g04010.t01	Wine grape	cytosol	71.05	79.56
Bra011609.1-P	Field mustard	cytosol	69.83	78.2
CDX69133	Canola	cytosol	69.83	78.2
CDX75497	Canola	cytosol	69.83	78.2
AT4G35360.1	Thale cress	cytosol	69.34	77.66
Solyc10g074590.1.1	Tomato	cytosol	69.1	77.38
AT2G17340.1	Thale cress	cytosol	68.61	76.84
PGSC0003DMT400038080	Potato	cytosol	67.15	75.82
AT2G17320.1	Thale cress	cytosol	64.48	73.41
CDX87995	Canola	cytosol	63.26	72.02
Bra009651.1-P	Field mustard	cytosol	63.26	72.02
CDY07861	Canola	cytosol	63.5	71.9
KRG92458	Soybean	plastid	60.58	68.41
KRH34342	Soybean	cytosol	32.12	66.67
PGSC0003DMT400043345	Potato	cytosol	70.32	66.59
KRG92457	Soybean	plastid	61.31	59.43
Solyc01g112270.1.1	Tomato	cytosol	18.98	51.32
KRH30808	Soybean	mitochondrion	34.55	42.9
HORVU3Hr1G078460.1	Barley	mitochondrion	12.17	35.46
Zm00001d021297_P008	Maize	cytosol	29.68	13.51
Zm00001d044985_P006	Maize	cytosol, extracellular	12.65	7.93

Protein Annotations

EnsemblPlants:Zm00001d045911_P002	EnsemblPlants:Zm00001d045911_T002	EnsemblPlantsGene:Zm00001d045911	Gene3D:1.20.1700.10	Gene3D:3.40.50.10880	InterPro:AF1104-like_sf
InterPro:At2g17340_3_helix_bundle	InterPro:DUF89	InterPro:IPR035073	InterPro:UCP030210	KEGG:00770+2.7.1.33	PANTHER:PTHR12280
PANTHER:PTHR12280:SF31	PFAM:PF01937	PIRSF:PIRSF030210	ProteinID:AQL03418.1	ProteinID:AQL03419.1	SEG:seg
SUPFAM:SSF111321	UniParc:UPI0008439379	UniProt:A0A1D6NZT3	MapMan:35.1	:	:

Description

Uncharacterised conserved protein (UCP030210)

Coordinates

chr9:+:47084953..47100426

Molecular Weight (calculated)

45254.5 Da

IEP (calculated)

5.002

GRAVY (calculated)

-0.086

Length

411 amino acids

Sequence
(BLAST)

001: MESSSPSVPF PLLQAPVEST YRACTIPYRF PSDNPRKATP VEIQWIDLFL NSVPSFKQRA ENDPTVPDAP AKAEKFAQRY TSMLEELKKN PESHGGPPDC
101: ILLCRLRELV LRELGFRDIF KKVKDEENAK AMSLFEGVIK RNDEIEDDGK RIENLVRGIL AGNIFDLGSA QLAEVFAKDG MSFLASCQNL VSRPWVIDDL
201: DAFKSKWTKK SWEKVAAAFL NLSACHLRRC CTVGALCCPP DVASAPAPCV RLTVHDSQSQ AVIFVDNSGA DIILGILPFA RELLRRGTKV ILAANDMPSI
301: NDVTYPELVE IINKLKDADG KLSNVDASGL LVANSGNDLP VIDLSSVSPE LAFMANDADL VVLEGMGRAI ETNLYAQMKC DSIKIGMVKH PEVAQFLGGR
401: LYDCVFKFNE A

Best Arabidopsis Sequence Match ( AT4G35360.1 )
(BLAST)

001: MESDSEMVAL PLLPTPIESN YRACTIPYRF PSDNPRKATP TEISWIDLFS NSIPSFKERA ESDTTVPDAP VRAEKFAKRY AEILEDLKKD PESHGGPPDC
101: ILLCRIRELI LRELGFRDIF KKVKDEENAK AISLFPEVVR LSDAINDEGK RIENLVRGIF AGNIFDLGSA QLAEVFSKDG MSFLASCQNL VSRPWVIDDL
201: DNFQARWLKK PWKKAVIFVD NSGADIILGI LPFAREMLRL GMQVVLAANE LPSINDVTYI ELAEILSKLN DENGQLMGVD TSNLLIANSG NDLPVIDLAR
301: VSQEVAYLSS DADLVILEGM GRGIETNLYA QFKCDSLKIG MVKHPEVAQF LGGRLYDCVI KYNEVQI

Arabidopsis Description

At4g35360/F23E12_80 [Source:UniProtKB/TrEMBL;Acc:Q8W4Q1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.