Factsheet for GSMUA_Achr9P12370_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0325500-01	Rice	extracellular, plasma membrane	86.96	87.67
EER88334	Sorghum	cytosol, plastid	86.68	87.4
TraesCS7D01G228000.1	Wheat	golgi, unclear	84.78	85.48
TraesCS7A01G226400.1	Wheat	cytosol, plastid	84.51	85.21
TraesCS7B01G193200.1	Wheat	cytosol, plastid	84.24	84.93
VIT_03s0038g04010.t01	Wine grape	cytosol	84.24	84.47
KRH38729	Soybean	cytosol, nucleus	81.79	82.02
Solyc10g074590.1.1	Tomato	cytosol	80.43	80.65
AT4G35360.1	Thale cress	cytosol	80.16	80.38
Bra011609.1-P	Field mustard	cytosol	80.16	80.38
CDX75497	Canola	cytosol	80.16	80.38
CDX69133	Canola	cytosol	79.89	80.11
AT2G17340.1	Thale cress	cytosol	78.53	78.75
PGSC0003DMT400038080	Potato	cytosol	76.9	77.75
Zm00001d045911_P002	Maize	cytosol, plastid	85.87	76.89
AT2G17320.1	Thale cress	cytosol	74.73	76.18
CDY07861	Canola	cytosol	72.28	73.28
CDX87995	Canola	cytosol	71.74	73.13
Bra009651.1-P	Field mustard	cytosol	71.74	73.13
KRH34342	Soybean	cytosol	38.32	71.21
KRG92458	Soybean	plastid	69.84	70.6
PGSC0003DMT400043345	Potato	cytosol	81.52	69.12
KRG92457	Soybean	plastid	69.84	60.61
Solyc01g112270.1.1	Tomato	cytosol	22.01	53.29
KRH30808	Soybean	mitochondrion	40.76	45.32
HORVU3Hr1G078460.1	Barley	mitochondrion	13.86	36.17
GSMUA_Achr6P09100_001	Banana	golgi	23.1	16.38
GSMUA_Achr6P09090_001	Banana	cytosol	10.33	8.17
GSMUA_Achr9P27330_001	Banana	cytosol	11.96	6.69

Protein Annotations

EnsemblPlants:GSMUA_Achr9P12370_001	EnsemblPlants:GSMUA_Achr9T12370_001	EnsemblPlantsGene:GSMUA_Achr9G12370_001	Gene3D:1.20.1700.10	Gene3D:3.40.50.10880	InterPro:AF1104-like_sf
InterPro:At2g17340_3_helix_bundle	InterPro:DUF89	InterPro:IPR035073	InterPro:UCP030210	KEGG:00770+2.7.1.33	PANTHER:PTHR12280
PANTHER:PTHR12280:SF31	PFAM:PF01937	PIRSF:PIRSF030210	SEG:seg	SUPFAM:SSF111321	UniParc:UPI0002959D74
UniProt:M0TZP6	MapMan:35.1	:	:	:	:

Description

Uncharacterized protein At2g17340 [Source:GMGC_GENE;Acc:GSMUA_Achr9G12370_001]

Coordinates

chr9:+:8071675..8081527

Molecular Weight (calculated)

41036.4 Da

IEP (calculated)

4.686

GRAVY (calculated)

-0.114

Length

368 amino acids

Sequence
(BLAST)

001: MESSSPTVPF PLLQTPIESK YRVCTIPYRF PSDNPRKATP VEIQWIDLFL NSAPSFRQRA ENDPTVVDAP IKAEKFAQRY TAMLEDMKKN PESNGGPPDC
101: VLLCRLREQV LRELGFRDIF KKVKDEENAK AISLFEGVVR LNDAIEDDSK RVENLIRGIL AGNIFDLGSA QLAEVFAKDG MSFLASCQNL VSRPWVIDDL
201: DDFKMKWTTK TWKKAVIFVD NSGADIILGV LPFARELLRR GTTVVLAAND LPSINDVTYP ELVEIISKLK DENGQLMGVD ASGLLIANSG NDLPVIDLSN
301: VSPDLAYLAS DADLVILEGM GRAIETNLYA QLKCDSIKIG MVKHPEVAQF LGGRLYDCVF KYHEVLNY

Best Arabidopsis Sequence Match ( AT4G35360.1 )
(BLAST)

001: MESDSEMVAL PLLPTPIESN YRACTIPYRF PSDNPRKATP TEISWIDLFS NSIPSFKERA ESDTTVPDAP VRAEKFAKRY AEILEDLKKD PESHGGPPDC
101: ILLCRIRELI LRELGFRDIF KKVKDEENAK AISLFPEVVR LSDAINDEGK RIENLVRGIF AGNIFDLGSA QLAEVFSKDG MSFLASCQNL VSRPWVIDDL
201: DNFQARWLKK PWKKAVIFVD NSGADIILGI LPFAREMLRL GMQVVLAANE LPSINDVTYI ELAEILSKLN DENGQLMGVD TSNLLIANSG NDLPVIDLAR
301: VSQEVAYLSS DADLVILEGM GRGIETNLYA QFKCDSLKIG MVKHPEVAQF LGGRLYDCVI KYNEVQI

Arabidopsis Description

At4g35360/F23E12_80 [Source:UniProtKB/TrEMBL;Acc:Q8W4Q1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.