Factsheet for Os06t0325500-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

cytosol 3
plastid 5

Predictors

GFP

MS/MS

Papers

extracellular: 19038476
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 19038476 doi

XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88334	Sorghum	cytosol, plastid	94.52	94.52
TraesCS7D01G228000.1	Wheat	golgi, unclear	92.88	92.88
TraesCS7A01G226400.1	Wheat	cytosol, plastid	92.6	92.6
TraesCS7B01G193200.1	Wheat	cytosol, plastid	92.33	92.33
GSMUA_Achr9P12370_001	Banana	cytosol	87.67	86.96
Zm00001d045911_P002	Maize	cytosol, plastid	93.97	83.45
VIT_03s0038g04010.t01	Wine grape	cytosol	80.0	79.56
Solyc10g074590.1.1	Tomato	cytosol	80.0	79.56
KRH38729	Soybean	cytosol, nucleus	79.45	79.02
Bra011609.1-P	Field mustard	cytosol	78.36	77.93
CDX69133	Canola	cytosol	78.36	77.93
CDX75497	Canola	cytosol	78.36	77.93
PGSC0003DMT400038080	Potato	cytosol	77.53	77.75
AT4G35360.1	Thale cress	cytosol	77.81	77.38
AT2G17340.1	Thale cress	cytosol	76.99	76.57
AT2G17320.1	Thale cress	cytosol	72.6	73.41
CDX87995	Canola	cytosol	69.86	70.64
Bra009651.1-P	Field mustard	cytosol	69.86	70.64
CDY07861	Canola	cytosol	70.14	70.52
KRG92458	Soybean	plastid	68.22	68.41
KRH34342	Soybean	cytosol	36.71	67.68
PGSC0003DMT400043345	Potato	cytosol	79.45	66.82
KRG92457	Soybean	plastid	69.04	59.43
Solyc01g112270.1.1	Tomato	cytosol	22.19	53.29
KRH30808	Soybean	mitochondrion	39.73	43.81
HORVU3Hr1G078460.1	Barley	mitochondrion	12.88	33.33
Os09t0533100-01	Rice	cytosol, plasma membrane	27.95	13.51
Os06t0207000-01	Rice	cytosol	12.05	6.61

Protein Annotations

KEGG:00770+2.7.1.33	Gene3D:1.20.1700.10	Gene3D:3.40.50.10880	MapMan:35.1	EntrezGene:4340905	InterPro:AF1104-like_sf
EMBL:AK063974	EMBL:AK099286	InterPro:At2g17340_3_helix_bundle	ProteinID:BAD33234.1	ProteinID:BAD61878.1	ProteinID:BAF19438.1
ProteinID:BAS97523.1	InterPro:DUF89	ProteinID:EAZ36831.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	InterPro:IPR035073
EnsemblPlantsGene:Os06g0325500	EnsemblPlants:Os06t0325500-01	PFAM:PF01937	PIRSF:PIRSF030210	PANTHER:PTHR12280	PANTHER:PTHR12280:SF31
UniProt:Q69T90	SUPFAM:SSF111321	InterPro:UCP030210	UniParc:UPI00003FF334	RefSeq:XP_015644532.1	SEG:seg

Description

Uncharacterised conserved protein UCP030210 domain containing protein. (Os06t0325500-01);Uncharacterised conserved protein UCP030210 domain containing protein. (Os06t0325500-02)

Coordinates

chr6:+:12708112..12713101

Molecular Weight (calculated)

40487.5 Da

IEP (calculated)

4.562

GRAVY (calculated)

-0.169

Length

365 amino acids

Sequence
(BLAST)

001: MESSSPSVPF PLLQAPVEST YRACTIPYRF ASDNPRKATP VEIQWIDLFL NSVPSFRQRA ENDPTVPDAP AKAEKFAQRY TAMLEELKKN PESNGGPPDC
101: ILLCRLRELV LRELGFRDIF KKVKDEENAK AMSLFEGVVQ RNDEIEDDGK RAENLIRGIL AGNIFDLGSA QLAEVFAKDG MSFLASCQNL VSRPWVIDDL
201: DAFQNKWTKK SWEKAVIFVD NSGADIILGI LPFARELLRH GTKVILAAND MPSINDVTYP ELVEIINKLK DENGKLAGVD ASDLLVANSG NDLPVIDLSS
301: VSPELAYLAN DADLVVLEGM GRAIETNLYA QMKCDSIKIG MVKHPEVAQF LGGRLYDCVF KFNEA

Best Arabidopsis Sequence Match ( AT4G35360.1 )
(BLAST)

001: MESDSEMVAL PLLPTPIESN YRACTIPYRF PSDNPRKATP TEISWIDLFS NSIPSFKERA ESDTTVPDAP VRAEKFAKRY AEILEDLKKD PESHGGPPDC
101: ILLCRIRELI LRELGFRDIF KKVKDEENAK AISLFPEVVR LSDAINDEGK RIENLVRGIF AGNIFDLGSA QLAEVFSKDG MSFLASCQNL VSRPWVIDDL
201: DNFQARWLKK PWKKAVIFVD NSGADIILGI LPFAREMLRL GMQVVLAANE LPSINDVTYI ELAEILSKLN DENGQLMGVD TSNLLIANSG NDLPVIDLAR
301: VSQEVAYLSS DADLVILEGM GRGIETNLYA QFKCDSLKIG MVKHPEVAQF LGGRLYDCVI KYNEVQI

Arabidopsis Description

At4g35360/F23E12_80 [Source:UniProtKB/TrEMBL;Acc:Q8W4Q1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.