Factsheet for AT2G17340.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G17320.1	Thale cress	cytosol	85.83	87.26
AT4G35360.1	Thale cress	cytosol	86.1	86.1
CDY07861	Canola	cytosol	84.47	85.4
Bra009651.1-P	Field mustard	cytosol	83.11	84.49
CDX87995	Canola	cytosol	83.11	84.49
KRH38729	Soybean	cytosol, nucleus	84.2	84.2
VIT_03s0038g04010.t01	Wine grape	cytosol	83.92	83.92
Solyc10g074590.1.1	Tomato	cytosol	82.02	82.02
GSMUA_Achr9P12370_001	Banana	cytosol	78.75	78.53
EER88334	Sorghum	cytosol, plastid	77.11	77.53
TraesCS7D01G228000.1	Wheat	golgi, unclear	76.57	76.99
Os06t0325500-01	Rice	extracellular, plasma membrane	76.57	76.99
TraesCS7B01G193200.1	Wheat	cytosol, plastid	76.29	76.71
TraesCS7A01G226400.1	Wheat	cytosol, plastid	76.29	76.71
KRG92458	Soybean	plastid	73.3	73.9
KRH34342	Soybean	cytosol	39.24	72.73
PGSC0003DMT400043345	Potato	cytosol	82.29	69.59
Zm00001d045911_P002	Maize	cytosol, plastid	76.84	68.61
KRG92457	Soybean	plastid	74.11	64.15
KRH30808	Soybean	mitochondrion	42.23	46.83
HORVU3Hr1G078460.1	Barley	mitochondrion	12.81	33.33
AT4G32180.1	Thale cress	cytosol	30.25	12.32
AT1G60440.1	Thale cress	cytosol	11.99	11.49

Protein Annotations

KEGG:00770+2.7.1.33	Gene3D:1.20.1700.10	PDB:1XFI	PDB:2Q40	Gene3D:3.40.50.10880	MapMan:35.1
EntrezGene:816241	ProteinID:AEC06614.1	InterPro:AF1104-like_sf	ArrayExpress:AT2G17340	EnsemblPlantsGene:AT2G17340	RefSeq:AT2G17340
TAIR:AT2G17340	RefSeq:AT2G17340-TAIR-G	EnsemblPlants:AT2G17340.1	TAIR:AT2G17340.1	EMBL:AY050977	EMBL:AY086556
EMBL:AY096682	InterPro:At2g17340_3_helix_bundle	InterPro:DUF89	InterPro:IPR035073	RefSeq:NP_565412.1	PFAM:PF01937
PIRSF:PIRSF030210	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025281	PANTHER:PTHR12280	PANTHER:PTHR12280:SF31	UniProt:Q949P3	SUPFAM:SSF111321	InterPro:UCP030210
UniParc:UPI00000A6537	:	:	:	:	:

Description

Uncharacterized protein At2g17340 [Source:UniProtKB/Swiss-Prot;Acc:Q949P3]

Coordinates

chr2:-:7541313..7544383

Molecular Weight (calculated)

40859.9 Da

IEP (calculated)

4.529

GRAVY (calculated)

-0.156

Length

367 amino acids

Sequence
(BLAST)

001: MESDSEMVPF PQLPMPIENN YRACTIPYRF PSDDPKKATP NEISWINVFA NSIPSFKKRA ESDITVPDAP ARAEKFAERY AGILEDLKKD PESHGGPPDG
101: ILLCRLREQV LRELGFRDIF KKVKDEENAK AISLFPQVVS LSDAIEDDGK RLENLVRGIF AGNIFDLGSA QLAEVFSRDG MSFLASCQNL VPRPWVIDDL
201: ENFQAKWINK SWKKAVIFVD NSGADIILGI LPFARELLRR GAQVVLAANE LPSINDITCT ELTEILSQLK DENGQLLGVD TSKLLIANSG NDLPVIDLSR
301: VSQELAYLSS DADLVIVEGM GRGIETNLYA QFKCDSLKIG MVKHLEVAEF LGGRLYDCVF KFNEVQS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.