CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009651.1-P	Field mustard	cytosol	100.0	100.0
CDY07861	Canola	cytosol	96.95	96.42
AT2G17320.1	Thale cress	cytosol	85.87	85.87
AT2G17340.1	Thale cress	cytosol	84.49	83.11
CDX75497	Canola	cytosol	81.99	80.65
CDX69133	Canola	cytosol	80.89	79.56
KRH38729	Soybean	cytosol, nucleus	79.5	78.2
VIT_03s0038g04010.t01	Wine grape	cytosol	78.67	77.38
Solyc10g074590.1.1	Tomato	cytosol	77.56	76.29
GSMUA_Achr9P12370_001	Banana	cytosol	73.13	71.74
EER88334	Sorghum	cytosol, plastid	72.3	71.51
KRH34342	Soybean	cytosol	38.78	70.71
TraesCS7D01G228000.1	Wheat	golgi, unclear	71.19	70.41
TraesCS7B01G193200.1	Wheat	cytosol, plastid	70.91	70.14
TraesCS7A01G226400.1	Wheat	cytosol, plastid	70.91	70.14
Os06t0325500-01	Rice	extracellular, plasma membrane	70.64	69.86
KRG92458	Soybean	plastid	69.81	69.23
PGSC0003DMT400043345	Potato	cytosol	78.12	64.98
Zm00001d045911_P002	Maize	cytosol, plastid	72.02	63.26
KRG92457	Soybean	plastid	70.91	60.38
KRH30808	Soybean	mitochondrion	40.44	44.11
HORVU3Hr1G078460.1	Barley	mitochondrion	14.13	36.17
CDX75226	Canola	cytosol	32.13	12.75
CDX68824	Canola	cytosol	31.86	12.69
CDY61390	Canola	cytosol	31.58	12.68
CDY40427	Canola	cytosol	9.7	11.74
CDY47225	Canola	cytosol	14.68	9.12
CDY53055	Canola	cytosol	14.68	9.11
CDY24491	Canola	cytosol	1.11	6.25

Protein Annotations

EnsemblPlants:CDX87995	EnsemblPlantsGene:GSBRNA2T00147395001	Gene3D:1.20.1700.10	Gene3D:3.40.50.10880	InterPro:AF1104-like_sf	InterPro:At2g17340_3_helix_bundle
InterPro:DUF89	InterPro:IPR035073	InterPro:UCP030210	KEGG:00770+2.7.1.33	PANTHER:PTHR12280	PANTHER:PTHR12280:SF31
PFAM:PF01937	PIRSF:PIRSF030210	ProteinID:CDX87995	ProteinID:CDX87995.1	SUPFAM:SSF111321	UniParc:UPI000253F01B
MapMan:35.1	:	:	:	:	:

Description

BnaA06g25860D

Coordinates

chrLK031854:+:39690..42239

Molecular Weight (calculated)

40135.7 Da

IEP (calculated)

4.390

GRAVY (calculated)

-0.146

Length

361 amino acids

Sequence
(BLAST)

001: MEMVPFPLIP KPIEVNYRAC TIPYRFPSDN PKIATPTEIS WINVFANSIP SFKKRAESDT TVSDAPARAQ QFAERYGGIL EDWKKDPESH GGPPDGVSLG
101: RAREHLLREL GFMDIFKKVK DEENAKAISL FPEVVSLSDA IEDEGERLQN LVRGMFAGNI FDLGSAQLAE VFSRDGLSFL ATSQNLVPRP WVIDDLDSFQ
201: SNWFKNHWKK AVIFVDNSGA DIILGILPFA REMLRRGMQV VLAANDLPAI NDVTYTELTE ILSQLNDEDG QLIGVDTSNL QVANSGNDLA VIDLSRVSQE
301: LADISADADL VIIEGMGRGI ETNLYAQFKC DSLKIGMVKH IEVAEFLGGR LYDCVFKYNE V

Best Arabidopsis Sequence Match ( AT2G17320.1 )
(BLAST)

001: MIPFPLLPTP IETNYRACTI PYRFPSDNLK KATPTEISWI NVFANSIPSF KKRAESDTSV PDAPARAKIF EQRYAGFLEG WKKDPESNGG PPDGVILGRV
101: REHLLRELGF RDIFKKVKDE ENAKAISLFP EVVSLSDAIE DDGERLENLV RGIFAGNIFD LGSAQLAEVF SRDGISFLAT SQNLVPRPWV IDDLNKFQAK
201: WVKKPWKKAV IFVDNSGADI ILGILPFARE LLRRGIQVVL AANELPAIND VTYTELTDIV SQLKDGNGQL IGVDTSKLLI ANSGNDLAVI DLSRVSHELA
301: YLSSDADLVI LEGMGRGIET NLYAQFKCDS LKIGMVKHVE VAQFLGGRLY DCVFKFNEVQ S

Arabidopsis Description

AT2G17320 protein [Source:UniProtKB/TrEMBL;Acc:B9DH75]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.