CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57072	Soybean	cytosol	59.38	11.73
CDY40427	Canola	cytosol	51.56	11.07
CDY47225	Canola	cytosol	51.56	5.68
CDY53055	Canola	cytosol	51.56	5.67
CDX68824	Canola	cytosol	78.12	5.52
CDX75226	Canola	cytosol	78.12	5.49
CDY61390	Canola	cytosol	75.0	5.34
Solyc03g112910.2.1	Tomato	cytosol, plastid	70.31	4.99
PGSC0003DMT400046738	Potato	cytosol	70.31	4.99
KRH19967	Soybean	cytosol	70.31	4.89
KRH54393	Soybean	cytosol	68.75	4.82
VIT_17s0000g08520.t01	Wine grape	cytosol	67.19	4.67
KRH03287	Soybean	cytosol	64.06	4.55
HORVU3Hr1G078450.1	Barley	cytosol	4.69	3.41
CDX75497	Canola	cytosol	7.81	1.36
CDX69133	Canola	cytosol	7.81	1.36
CDX87995	Canola	cytosol	6.25	1.11
CDY07861	Canola	cytosol	6.25	1.1
GSMUA_Achr6P09100_001	Banana	golgi	4.69	0.58

Protein Annotations

KEGG:00770+2.7.1.33	Gene3D:3.30.420.510	MapMan:35.1	GO:A0A078GGI5	UniProt:A0A078GGI5	EnsemblPlants:CDY24491
ProteinID:CDY24491	ProteinID:CDY24491.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004594
GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015937	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00026784001
PFAM:PF03630	PANTHER:PTHR12280	PANTHER:PTHR12280:SF34	MetaCyc:PWY-3961	SUPFAM:SSF53067	InterPro:Type_II_PanK
UniPathway:UPA00241	UniParc:UPI0004EE9C5B	:	:	:	:

Description

BnaC05g34630DBnaC05g34630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GGI5]

Coordinates

chrLK032159:-:606378..607225

Molecular Weight (calculated)

7497.9 Da

IEP (calculated)

4.375

GRAVY (calculated)

-0.408

Length

64 amino acids

Sequence
(BLAST)

1: MYTRLVQGRL GVTIEKEDEM HCLVSGANFL LKAIRHEAFT NTESEKEFVQ IDPNDLYPEQ WLEL

Best Arabidopsis Sequence Match ( AT4G32180.2 )
(BLAST)

001: MAGQEDEYDP ILDNKREAEA KSQVSVAADK NMAPSTSGTP IHRSGSRPQL DLSKAEIQGN LEERDPTILL PNQSDDISHL ALDIGGSLIK LLYFSRHEDY
101: SNDDDKRKRT IKERLGITNG NLRSYPVLGG RLHFVKFETH KINECLDFIH SKQLHRRDPY PWSSKTLPLG TGVIKVTGGG AFKFADLFKE RLGVSIEKED
201: EMHCLVSGAN FLLKAIRHEA FTHMEGEKEF VQIDPNDLYP YLLVNVGSGV SIIKVDGEGK FERVSGTNVG GGTYWGLGRL LTKCKSFDEL LELSQKGDNS
301: AIDMLVGDIY GGMDYSKIGL SASTIASSFG KAISENKELD DYRPEDISLS LLRMISYNIG QISYLNALRF GLKRIFFGGF FIRGHAYTMD TISFAVHFWS
401: KGEMQAMFLR HEGFLGALGA FMSYEKHGLD DLMSHQLVER FPMGAPYTGG NIHGPPLGDL DEKISWMEKF VRRGTEITAP VPMTPSKTTG LGGFEVPSSR
501: GSALRSDASA LNVGVLHLVP TLEVFPLLAD PKTYEPNTID LSDQGEREYW LKVLSEHLPD LVDTAVASEG GTEDAKRRGD AFARAFSAHL ARLMEEPAAY
601: GKLGLANLLE LREECLREFQ FVDAYRSIKQ RENEASLAVL PDLLEELDSM SEEARLLTLI EGVLAANIFD WGSRACVDLY HKGTIIEIYR MSRNKMQRPW
701: RVDDFDAFKE RMLGSGGKQP HRHKRALLFV DNSGADVILG MLPLAREFLR RGTEVVLVAN SLPALNDVTA MELPDIVAGA AKV

Arabidopsis Description

PANK2PANK2 [Source:UniProtKB/TrEMBL;Acc:A0A178V4D0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.