Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011609.1-P | Field mustard | cytosol | 95.91 | 95.91 |
| CDX75497 | Canola | cytosol | 95.91 | 95.91 |
| CDX69133 | Canola | cytosol | 94.82 | 94.82 |
| AT2G17340.1 | Thale cress | cytosol | 86.1 | 86.1 |
| KRH38729 | Soybean | cytosol, nucleus | 86.1 | 86.1 |
| VIT_03s0038g04010.t01 | Wine grape | cytosol | 85.56 | 85.56 |
| AT2G17320.1 | Thale cress | cytosol | 81.2 | 82.55 |
| Solyc10g074590.1.1 | Tomato | cytosol | 81.47 | 81.47 |
| GSMUA_Achr9P12370_001 | Banana | cytosol | 80.38 | 80.16 |
| EER88334 | Sorghum | cytosol, plastid | 77.38 | 77.81 |
| TraesCS7D01G228000.1 | Wheat | golgi, unclear | 77.38 | 77.81 |
| Os06t0325500-01 | Rice | extracellular, plasma membrane | 77.38 | 77.81 |
| TraesCS7A01G226400.1 | Wheat | cytosol, plastid | 77.11 | 77.53 |
| TraesCS7B01G193200.1 | Wheat | cytosol, plastid | 76.84 | 77.26 |
| KRH34342 | Soybean | cytosol | 40.33 | 74.75 |
| KRG92458 | Soybean | plastid | 72.21 | 72.8 |
| PGSC0003DMT400043345 | Potato | cytosol | 82.56 | 69.82 |
| Zm00001d045911_P002 | Maize | cytosol, plastid | 77.66 | 69.34 |
| KRG92457 | Soybean | plastid | 72.75 | 62.97 |
| KRH30808 | Soybean | mitochondrion | 41.69 | 46.22 |
| HORVU3Hr1G078460.1 | Barley | mitochondrion | 13.62 | 35.46 |
| AT1G60440.1 | Thale cress | cytosol | 13.35 | 12.79 |
| AT4G32180.1 | Thale cress | cytosol | 30.79 | 12.54 |
Protein Annotations
| KEGG:00770+2.7.1.33 | Gene3D:1.20.1700.10 | Gene3D:3.40.50.10880 | MapMan:35.1 | EntrezGene:829689 | ProteinID:AEE86503.1 |
| InterPro:AF1104-like_sf | ProteinID:ANM66429.1 | ArrayExpress:AT4G35360 | EnsemblPlantsGene:AT4G35360 | RefSeq:AT4G35360 | TAIR:AT4G35360 |
| RefSeq:AT4G35360-TAIR-G | EnsemblPlants:AT4G35360.1 | TAIR:AT4G35360.1 | EMBL:AY062112 | EMBL:AY143933 | InterPro:At2g17340_3_helix_bundle |
| InterPro:DUF89 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | InterPro:IPR035073 | RefSeq:NP_001328325.1 | RefSeq:NP_567984.1 |
| PFAM:PF01937 | PIRSF:PIRSF030210 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PANTHER:PTHR12280 | PANTHER:PTHR12280:SF31 | UniProt:Q8W4Q1 | SUPFAM:SSF111321 | InterPro:UCP030210 | UniParc:UPI00000AC2E8 |
| SEG:seg | : | : | : | : | : |
Description
At4g35360/F23E12_80 [Source:UniProtKB/TrEMBL;Acc:Q8W4Q1]
Coordinates
chr4:-:16812076..16814926
Molecular Weight (calculated)
41003.3 Da
IEP (calculated)
4.529
GRAVY (calculated)
-0.099
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MESDSEMVAL PLLPTPIESN YRACTIPYRF PSDNPRKATP TEISWIDLFS NSIPSFKERA ESDTTVPDAP VRAEKFAKRY AEILEDLKKD PESHGGPPDC
101: ILLCRIRELI LRELGFRDIF KKVKDEENAK AISLFPEVVR LSDAINDEGK RIENLVRGIF AGNIFDLGSA QLAEVFSKDG MSFLASCQNL VSRPWVIDDL
201: DNFQARWLKK PWKKAVIFVD NSGADIILGI LPFAREMLRL GMQVVLAANE LPSINDVTYI ELAEILSKLN DENGQLMGVD TSNLLIANSG NDLPVIDLAR
301: VSQEVAYLSS DADLVILEGM GRGIETNLYA QFKCDSLKIG MVKHPEVAQF LGGRLYDCVI KYNEVQI
101: ILLCRIRELI LRELGFRDIF KKVKDEENAK AISLFPEVVR LSDAINDEGK RIENLVRGIF AGNIFDLGSA QLAEVFSKDG MSFLASCQNL VSRPWVIDDL
201: DNFQARWLKK PWKKAVIFVD NSGADIILGI LPFAREMLRL GMQVVLAANE LPSINDVTYI ELAEILSKLN DENGQLMGVD TSNLLIANSG NDLPVIDLAR
301: VSQEVAYLSS DADLVILEGM GRGIETNLYA QFKCDSLKIG MVKHPEVAQF LGGRLYDCVI KYNEVQI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.