Factsheet for Bra011609.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
nucleus 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75497	Canola	cytosol	100.0	100.0
CDX69133	Canola	cytosol	98.64	98.64
AT4G35360.1	Thale cress	cytosol	95.91	95.91
KRH38729	Soybean	cytosol, nucleus	86.65	86.65
VIT_03s0038g04010.t01	Wine grape	cytosol	85.29	85.29
Solyc10g074590.1.1	Tomato	cytosol	82.29	82.29
Bra009651.1-P	Field mustard	cytosol	80.65	81.99
GSMUA_Achr9P12370_001	Banana	cytosol	80.38	80.16
EER88334	Sorghum	cytosol, plastid	77.93	78.36
Os06t0325500-01	Rice	extracellular, plasma membrane	77.93	78.36
TraesCS7D01G228000.1	Wheat	golgi, unclear	77.66	78.08
TraesCS7A01G226400.1	Wheat	cytosol, plastid	77.38	77.81
TraesCS7B01G193200.1	Wheat	cytosol, plastid	77.11	77.53
KRH34342	Soybean	cytosol	40.05	74.24
KRG92458	Soybean	plastid	73.57	74.18
PGSC0003DMT400043345	Potato	cytosol	82.83	70.05
Zm00001d045911_P002	Maize	cytosol, plastid	78.2	69.83
KRG92457	Soybean	plastid	74.11	64.15
KRH30808	Soybean	mitochondrion	42.23	46.83
HORVU3Hr1G078460.1	Barley	mitochondrion	13.62	35.46
Bra011327.1-P	Field mustard	cytosol	31.06	12.53
Bra040069.1-P	Field mustard	cytosol	30.52	12.46
Bra027158.1-P	Field mustard	cytosol	14.71	9.28

Protein Annotations

EnsemblPlants:Bra011609.1	EnsemblPlants:Bra011609.1-P	EnsemblPlantsGene:Bra011609	Gene3D:1.20.1700.10	Gene3D:3.40.50.10880	InterPro:AF1104-like_sf
InterPro:At2g17340_3_helix_bundle	InterPro:DUF89	InterPro:IPR035073	InterPro:UCP030210	KEGG:00770+2.7.1.33	PANTHER:PTHR12280
PANTHER:PTHR12280:SF31	PFAM:PF01937	PIRSF:PIRSF030210	SEG:seg	SUPFAM:SSF111321	UniParc:UPI0002547129
UniProt:M4D552	MapMan:35.1	:	:	:	:

Description

AT4G35360 (E=2e-191) | pantothenate kinase family protein

Coordinates

chrA01:+:1428182..1430365

Molecular Weight (calculated)

41073.4 Da

IEP (calculated)

4.529

GRAVY (calculated)

-0.113

Length

367 amino acids

Sequence
(BLAST)

001: MESDSVMVPF PLLPVPIESN YRACTIPYRF PSDNPRKATP TEISWIDLFS NSIPSFKERA ESDTSVPDAP VRAEKFAQRY AEILEDLKKD PESHGGPPDC
101: ILLCRIRELI LRELGFRDIF KKVKDEENAK AITLFPEVVR LSDAIEDEGK RIENLVRGIF AGNIFDLGSA QLAEVFSKDG MSFLASCQNL VPRPWVIDDL
201: DNFQARWLKK PWKKAVIFVD NSGADIILGI LPFAREMLRQ GMQVVLAANE LPSINDVTYT ELAEILSKLK DENGQLMGVD ISNLLIANSG NDLPVIDLAR
301: VSQEVAYLST DADLVILEGM GRGIETNLYA QFKCDSLKIG MVKHPEVAQF LGGRLYDCVI KYNEVQS

Best Arabidopsis Sequence Match ( AT4G35360.1 )
(BLAST)

001: MESDSEMVAL PLLPTPIESN YRACTIPYRF PSDNPRKATP TEISWIDLFS NSIPSFKERA ESDTTVPDAP VRAEKFAKRY AEILEDLKKD PESHGGPPDC
101: ILLCRIRELI LRELGFRDIF KKVKDEENAK AISLFPEVVR LSDAINDEGK RIENLVRGIF AGNIFDLGSA QLAEVFSKDG MSFLASCQNL VSRPWVIDDL
201: DNFQARWLKK PWKKAVIFVD NSGADIILGI LPFAREMLRL GMQVVLAANE LPSINDVTYI ELAEILSKLN DENGQLMGVD TSNLLIANSG NDLPVIDLAR
301: VSQEVAYLSS DADLVILEGM GRGIETNLYA QFKCDSLKIG MVKHPEVAQF LGGRLYDCVI KYNEVQI

Arabidopsis Description

At4g35360/F23E12_80 [Source:UniProtKB/TrEMBL;Acc:Q8W4Q1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.