CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KXG19566

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G60440.1	KXG19566	AT1G60440.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044985_P006	Maize	cytosol, extracellular	92.91	93.9
TraesCS7B01G071900.3	Wheat	cytosol	83.71	84.86
TraesCS7A01G167300.1	Wheat	cytosol	83.56	84.71
TraesCS7D01G167900.1	Wheat	cytosol	82.96	84.1
Os06t0207000-01	Rice	cytosol	82.2	81.83
HORVU7Hr1G035030.7	Barley	cytosol, mitochondrion, plastid	79.19	77.43
GSMUA_Achr9P27330_001	Banana	cytosol	68.17	68.69
CDY40427	Canola	cytosol	20.51	45.64
AT1G60440.1	Thale cress	cytosol	25.94	44.91
VIT_01s0127g00490.t01	Wine grape	cytosol	28.05	44.39
KRG99350	Soybean	cytosol	26.24	42.13
PGSC0003DMT400035152	Potato	cytosol	25.34	39.44
Solyc05g005250.2.1	Tomato	cytosol	25.04	38.97
KRH45653	Soybean	cytosol	25.19	38.93
CDY47225	Canola	cytosol	29.26	33.39
CDY53055	Canola	cytosol	29.26	33.33
Bra027158.1-P	Field mustard	cytosol	29.26	33.33
EER97090	Sorghum	cytosol	36.5	26.83
EER88334	Sorghum	cytosol, plastid	6.94	12.6

Protein Annotations

KEGG:00770+2.7.1.33	Gene3D:1.10.8.780	Gene3D:3.30.420.40	Gene3D:3.30.420.510	MapMan:7.4.2	UniProt:A0A194YIY9
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004594	GO:GO:0005488
GO:GO:0005524	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0015937	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	EnsemblPlants:KXG19566	ProteinID:KXG19566
ProteinID:KXG19566.1	ProteinID:KXG19567.1	PFAM:PF03630	PANTHER:PTHR12280	PANTHER:PTHR12280:SF29	MetaCyc:PWY-3961
EnsemblPlantsGene:SORBI_3010G078100	SUPFAM:SSF53067	TIGRFAMs:TIGR00555	InterPro:Type_II_PanK	UniParc:UPI0001C8059F	SEG:seg

Description

hypothetical protein

Coordinates

chr10:+:6503414..6512227

Molecular Weight (calculated)

71454.1 Da

IEP (calculated)

5.225

GRAVY (calculated)

-0.088

Length

663 amino acids

Sequence
(BLAST)

001: MGEATGHGDG VGVGVDLSGA EIRGGLEDRN PPIFLPRQPA ASPLLALDIG GTLIKLVYTA SCGGGADGAD LRFAKFERRR LQECFDFIRA EGLLACNGGT
101: RPGGENVTLK ATGGGAYKFA DDFLEKLGVC LDKLDEMDSV VSGANFLLQN IPGAAFTHMN GQRNPVDVSP NNLFPYLLVN IGSGVSILKV TGNKKFERVT
201: GTHIGGGTMF GLAKLLTGCK SYDEFLQLSQ KGDNFVLDLI VKDICGELVC QKQGLSTSTL ASSFGKVITS EKKLTDYKPE DIASTLLSAF TYNIAQIAFL
301: VASLLGLRRV FFGGSYIRGH KSTMENISYA IDFWSQSQMQ AVFLRHEGYL GALGALMSYG DPSGENLTLE EKEPHHESAP VDGTSADEEN DSNIFPYLLV
401: NIGSGVSMIE VIGKGRFERI IGSHLGGGTI LGLARLLTGC SSYEEFLELS QRGNNLSVDL TVGDIYGGEG YPKIGLPAST TAASFGKVNS SKLSEYKVED
501: LAAALLNSFT YNIGQIAYFV ANLSGLKRIF FRGAYVCGHE KTMDKISRSL KYWSKGEVQT TFLCHEGFLG TLGAFWSYEN MGIDSLAAHE VIREVLLGAP
601: YTGQFPSLPV TQQQENGEHS TLEGEVENLR HDNAVLKAEV ERLQRENAEL RAKLVRSGET STL

Best Arabidopsis Sequence Match ( AT4G32180.2 )
(BLAST)

001: MAGQEDEYDP ILDNKREAEA KSQVSVAADK NMAPSTSGTP IHRSGSRPQL DLSKAEIQGN LEERDPTILL PNQSDDISHL ALDIGGSLIK LLYFSRHEDY
101: SNDDDKRKRT IKERLGITNG NLRSYPVLGG RLHFVKFETH KINECLDFIH SKQLHRRDPY PWSSKTLPLG TGVIKVTGGG AFKFADLFKE RLGVSIEKED
201: EMHCLVSGAN FLLKAIRHEA FTHMEGEKEF VQIDPNDLYP YLLVNVGSGV SIIKVDGEGK FERVSGTNVG GGTYWGLGRL LTKCKSFDEL LELSQKGDNS
301: AIDMLVGDIY GGMDYSKIGL SASTIASSFG KAISENKELD DYRPEDISLS LLRMISYNIG QISYLNALRF GLKRIFFGGF FIRGHAYTMD TISFAVHFWS
401: KGEMQAMFLR HEGFLGALGA FMSYEKHGLD DLMSHQLVER FPMGAPYTGG NIHGPPLGDL DEKISWMEKF VRRGTEITAP VPMTPSKTTG LGGFEVPSSR
501: GSALRSDASA LNVGVLHLVP TLEVFPLLAD PKTYEPNTID LSDQGEREYW LKVLSEHLPD LVDTAVASEG GTEDAKRRGD AFARAFSAHL ARLMEEPAAY
601: GKLGLANLLE LREECLREFQ FVDAYRSIKQ RENEASLAVL PDLLEELDSM SEEARLLTLI EGVLAANIFD WGSRACVDLY HKGTIIEIYR MSRNKMQRPW
701: RVDDFDAFKE RMLGSGGKQP HRHKRALLFV DNSGADVILG MLPLAREFLR RGTEVVLVAN SLPALNDVTA MELPDIVAGA AKV

Arabidopsis Description

PANK2PANK2 [Source:UniProtKB/TrEMBL;Acc:A0A178V4D0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.