Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400035152 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G60440.1 | PGSC0003DMT400035152 | AT1G60440.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g005250.2.1 | Tomato | cytosol | 92.25 | 92.25 |
| AT1G60440.1 | Thale cress | cytosol | 57.51 | 63.97 |
| CDY40427 | Canola | cytosol | 44.6 | 63.76 |
| VIT_01s0127g00490.t01 | Wine grape | cytosol | 59.39 | 60.38 |
| KRG99350 | Soybean | cytosol | 57.04 | 58.84 |
| KRH45653 | Soybean | cytosol | 55.87 | 55.48 |
| GSMUA_Achr6P09090_001 | Banana | cytosol | 53.76 | 49.25 |
| Bra027158.1-P | Field mustard | cytosol | 59.39 | 43.47 |
| CDY47225 | Canola | cytosol | 59.15 | 43.37 |
| CDY53055 | Canola | cytosol | 58.45 | 42.78 |
| HORVU5Hr1G033110.2 | Barley | cytosol | 30.28 | 28.92 |
| PGSC0003DMT400046738 | Potato | cytosol | 55.16 | 26.08 |
| KXG19566 | Sorghum | cytosol | 39.44 | 25.34 |
| TraesCS7B01G071900.3 | Wheat | cytosol | 38.5 | 25.08 |
| Zm00001d044985_P006 | Maize | cytosol, extracellular | 38.5 | 25.0 |
| TraesCS7A01G167300.1 | Wheat | cytosol | 38.26 | 24.92 |
| TraesCS7D01G167900.1 | Wheat | cytosol | 38.03 | 24.77 |
| Os06t0207000-01 | Rice | cytosol | 37.56 | 24.02 |
| PGSC0003DMT400038080 | Potato | cytosol | 11.27 | 13.19 |
| PGSC0003DMT400043345 | Potato | cytosol | 11.97 | 11.75 |
Protein Annotations
| KEGG:00770+2.7.1.33 | Gene3D:1.10.8.780 | EntrezGene:102588717 | Gene3D:3.30.420.40 | Gene3D:3.30.420.510 | MapMan:7.4.2 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004594 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015937 |
| GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | UniProt:M1B1W1 | PFAM:PF03630 | EnsemblPlantsGene:PGSC0003DMG400013511 |
| PGSC:PGSC0003DMG400013511 | EnsemblPlants:PGSC0003DMT400035152 | PANTHER:PTHR12280 | PANTHER:PTHR12280:SF34 | SUPFAM:SSF53067 | TIGRFAMs:TIGR00555 |
| InterPro:Type_II_PanK | UniParc:UPI0002966468 | RefSeq:XP_006356432.1 | SEG:seg | : | : |
Description
Pantothenate kinase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400013511]
Coordinates
chr5:-:8807178..8817341
Molecular Weight (calculated)
47044.1 Da
IEP (calculated)
6.646
GRAVY (calculated)
-0.258
Length
426 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVKGIDGKL EKSDSTSADE ISHLSIDIGG SLIKIVYFST NSKCSTNDEA PTLSKERQEV PNGDLNHHIL SGRLYFVNFE TSKIEDCIKF LSSKKLQQCG
101: AQCHHSHAVD KIKIKATGGG AFKFADLFKE KLGLTLDKVE EMESVVTGAN FLLKAVNHEV YTYIGGQKEY VQIDQNDLYP YLLVNIGSGV GMIKVDGDGK
201: FQRVSGTSVG GGTFLGLGKL LTKCQSFDEL LELSHQGNNR VIDMLVGDIY GGLDYSKIGL ASTAIASSFG KAISENKELE DYKPEDIARS LLRMISNNIG
301: QIAYLNALRF GLKRIFLGGF FIRDHAYTMD TISVAVDFWS KGEAKAMFLR HEGFLGALGA FMNYKDESTD SMPPQLVEQQ PAKRSSSCIV DRIHNSTRVH
401: ENENGATDCR LRVSSSFKIY DEVKRC
101: AQCHHSHAVD KIKIKATGGG AFKFADLFKE KLGLTLDKVE EMESVVTGAN FLLKAVNHEV YTYIGGQKEY VQIDQNDLYP YLLVNIGSGV GMIKVDGDGK
201: FQRVSGTSVG GGTFLGLGKL LTKCQSFDEL LELSHQGNNR VIDMLVGDIY GGLDYSKIGL ASTAIASSFG KAISENKELE DYKPEDIARS LLRMISNNIG
301: QIAYLNALRF GLKRIFLGGF FIRDHAYTMD TISVAVDFWS KGEAKAMFLR HEGFLGALGA FMNYKDESTD SMPPQLVEQQ PAKRSSSCIV DRIHNSTRVH
401: ENENGATDCR LRVSSSFKIY DEVKRC
001: MAGQEDEYDP ILDNKREAEA KSQVSVAADK NMAPSTSGTP IHRSGSRPQL DLSKAEIQGN LEERDPTILL PNQSDDISHL ALDIGGSLIK LLYFSRHEDY
101: SNDDDKRKRT IKERLGITNG NLRSYPVLGG RLHFVKFETH KINECLDFIH SKQLHRRDPY PWSSKTLPLG TGVIKVTGGG AFKFADLFKE RLGVSIEKED
201: EMHCLVSGAN FLLKAIRHEA FTHMEGEKEF VQIDPNDLYP YLLVNVGSGV SIIKVDGEGK FERVSGTNVG GGTYWGLGRL LTKCKSFDEL LELSQKGDNS
301: AIDMLVGDIY GGMDYSKIGL SASTIASSFG KAISENKELD DYRPEDISLS LLRMISYNIG QISYLNALRF GLKRIFFGGF FIRGHAYTMD TISFAVHFWS
401: KGEMQAMFLR HEGFLGALGA FMSYEKHGLD DLMSHQLVER FPMGAPYTGG NIHGPPLGDL DEKISWMEKF VRRGTEITAP VPMTPSKTTG LGGFEVPSSR
501: GSALRSDASA LNVGVLHLVP TLEVFPLLAD PKTYEPNTID LSDQGEREYW LKVLSEHLPD LVDTAVASEG GTEDAKRRGD AFARAFSAHL ARLMEEPAAY
601: GKLGLANLLE LREECLREFQ FVDAYRSIKQ RENEASLAVL PDLLEELDSM SEEARLLTLI EGVLAANIFD WGSRACVDLY HKGTIIEIYR MSRNKMQRPW
701: RVDDFDAFKE RMLGSGGKQP HRHKRALLFV DNSGADVILG MLPLAREFLR RGTEVVLVAN SLPALNDVTA MELPDIVAGA AKV
101: SNDDDKRKRT IKERLGITNG NLRSYPVLGG RLHFVKFETH KINECLDFIH SKQLHRRDPY PWSSKTLPLG TGVIKVTGGG AFKFADLFKE RLGVSIEKED
201: EMHCLVSGAN FLLKAIRHEA FTHMEGEKEF VQIDPNDLYP YLLVNVGSGV SIIKVDGEGK FERVSGTNVG GGTYWGLGRL LTKCKSFDEL LELSQKGDNS
301: AIDMLVGDIY GGMDYSKIGL SASTIASSFG KAISENKELD DYRPEDISLS LLRMISYNIG QISYLNALRF GLKRIFFGGF FIRGHAYTMD TISFAVHFWS
401: KGEMQAMFLR HEGFLGALGA FMSYEKHGLD DLMSHQLVER FPMGAPYTGG NIHGPPLGDL DEKISWMEKF VRRGTEITAP VPMTPSKTTG LGGFEVPSSR
501: GSALRSDASA LNVGVLHLVP TLEVFPLLAD PKTYEPNTID LSDQGEREYW LKVLSEHLPD LVDTAVASEG GTEDAKRRGD AFARAFSAHL ARLMEEPAAY
601: GKLGLANLLE LREECLREFQ FVDAYRSIKQ RENEASLAVL PDLLEELDSM SEEARLLTLI EGVLAANIFD WGSRACVDLY HKGTIIEIYR MSRNKMQRPW
701: RVDDFDAFKE RMLGSGGKQP HRHKRALLFV DNSGADVILG MLPLAREFLR RGTEVVLVAN SLPALNDVTA MELPDIVAGA AKV
Arabidopsis Description
PANK2PANK2 [Source:UniProtKB/TrEMBL;Acc:A0A178V4D0]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.