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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 5
  • plastid 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d021297_P008 Maize cytosol 96.78 96.68
Os09t0533100-01 Rice cytosol, plasma membrane 79.05 94.44
HORVU5Hr1G081790.31 Barley peroxisome 72.17 91.69
TraesCS5B01G320900.1 Wheat cytosol 89.91 90.31
TraesCS5D01G327300.3 Wheat cytosol 89.47 90.07
TraesCS5A01G320600.2 Wheat cytosol 89.36 89.96
KXG19566 Sorghum cytosol 26.83 36.5
EER88334 Sorghum cytosol, plastid 12.75 31.51
Protein Annotations
KEGG:00770+2.7.1.33Gene3D:1.10.8.780Gene3D:1.20.1700.10Gene3D:3.30.420.40Gene3D:3.30.420.510MapMan:7.4.2
EntrezGene:8063305InterPro:AF1104-like_sfInterPro:At2g17340_3_helix_bundleUniProt:C5X682InterPro:DUF89EnsemblPlants:EER97090
ProteinID:EER97090ProteinID:EER97090.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004594
GO:GO:0005488GO:GO:0005524GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0015937GO:GO:0016301GO:GO:0016310GO:GO:0016740InterPro:IPR035073
PFAM:PF01937PFAM:PF03630PIRSF:PIRSF036939PANTHER:PTHR12280PANTHER:PTHR12280:SF34MetaCyc:PWY-3961
InterPro:PanK_longEnsemblPlantsGene:SORBI_3002G275700SUPFAM:SSF111321SUPFAM:SSF53067unigene:Sbi.12840TIGRFAMs:TIGR00555
InterPro:Type_II_PanKUniParc:UPI0001A83983RefSeq:XP_002460569.1SEG:seg::
Description
hypothetical protein
Coordinates
chr2:+:65842700..65852196
Molecular Weight (calculated)
99475.5 Da
IEP (calculated)
5.877
GRAVY (calculated)
-0.178
Length
902 amino acids
Sequence
(BLAST)
001: MAANNSDPIP DQLGEGGAGV KHETGEEVGE ETSSSAAQAT ATTMLPRSSS RPQLDLSGAA IHGTLEDRNP TILLPNQSDD ISHLALDIGG SLIKLVYFSR
101: HAELSTEDKR KISTKRKLGM FNGGRRSYPI LGGRLHFVKF ETGKLNECLD FISSKQLHRG GIDSPSWRSG AQPDDIVIKA TGGGAYKYAD VFKERLGVSL
201: EKEDEMDCLV AGANFLLKAI RHEAFTHMDG QKRYVQIDQN DLFPFLLVNI GSGVSIIKVD GHGEFQRVSG TNVGGGTYWG LGKLMTKCKS FDELLELSQR
301: GDNSTMDMLI GDIYGGLDYS KIGLSASTIA SSFGKIISEN KELSDYRPED ISLSLLRMIS YNIGQISYLN ALRYGLKRIF FGGFFIRGHA YTMDTISFAV
401: HFWSKGEAQA MFLRHEGFLG ALGAFMSYEK HGLDDLRAHH LVERFPMGAP YVGGKIHGPP LGDLNEKISW MEKFVQKGTQ ITAPVPMGVP ATTGMGGFER
501: PTSKGDILRS DASAALNVGV LHLVPTLDVF PLLEDPKTYE PNTIDLDQDE FKYWFKILSD HLPDLVDKAV ASEGGTDDAK RRGDAFAHAF SAHLARLMEE
601: PAAYGKFGLV NLLELREECL REFQFVDAYI SIKQRENEAS LAVLPDLLME LDSMNEEARL LALIEGVLAA NIFDWGSRAC VELYHKGTII EIYRMSRKKM
701: QRPWRIDDFD MFKKRMLTDR KDQPYKRALL FVDNSGADVV LGMLPLAREL LRRGTEVVLV ANSLPALNDV TANELPEIIA EASKHCSILR KAAEAGGLIV
801: DAMAGIQDDL KDEPVSVPLM VVENGCGSPC IDFRQVSSEL AAAAKDADLL ILEGMGRSLH TNLNAHFKCD ALKLAMVKNK RLAEKLFNGN IYDCICKFEP
901: VF
Best Arabidopsis Sequence Match ( AT4G32180.1 )
(BLAST)
001: MAGQEDEYDP ILDNKREAEA KSQVSVAADK NMAPSTSGTP IHRSGSRPQL DLSKAEIQGN LEERDPTILL PNQSDDISHL ALDIGGSLIK LLYFSRHEDY
101: SNDDDKRKRT IKERLGITNG NLRSYPVLGG RLHFVKFETH KINECLDFIH SKQLHRRDPY PWSSKTLPLG TGVIKVTGGG AFKFADLFKE RLGVSIEKED
201: EMHCLVSGAN FLLKAIRHEA FTHMEGEKEF VQIDPNDLYP YLLVNVGSGV SIIKVDGEGK FERVSGTNVG GGTYWGLGRL LTKCKSFDEL LELSQKGDNS
301: AIDMLVGDIY GGMDYSKIGL SASTIASSFG KAISENKELD DYRPEDISLS LLRMISYNIG QISYLNALRF GLKRIFFGGF FIRGHAYTMD TISFAVHFWS
401: KGEMQAMFLR HEGFLGALGA FMSYEKHGLD DLMSHQLVER FPMGAPYTGG NIHGPPLGDL DEKISWMEKF VRRGTEITAP VPMTPSKTTG LGGFEVPSSR
501: GSALRSDASA LNVGVLHLVP TLEVFPLLAD PKTYEPNTID LSDQGEREYW LKVLSEHLPD LVDTAVASEG GTEDAKRRGD AFARAFSAHL ARLMEEPAAY
601: GKLGLANLLE LREECLREFQ FVDAYRSIKQ RENEASLAVL PDLLEELDSM SEEARLLTLI EGVLAANIFD WGSRACVDLY HKGTIIEIYR MSRNKMQRPW
701: RVDDFDAFKE RMLGSGGKQP HRHKRALLFV DNSGADVILG MLPLAREFLR RGTEVVLVAN SLPALNDVTA MELPDIVAGA AKHCDILRRA AEMGGLLVDA
801: MVNPGDGSKK DSTSAPLMVV ENGCGSPCID LRQVSSELAA AAKDADLVVL EGMGRALHTN FNAQFQCEAL KLAMVKNQRL AEKLIKGNIY DCVCRYEPPS
901: L
Arabidopsis Description
PANK2PANK2 [Source:UniProtKB/TrEMBL;Acc:A0A178V4D0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.