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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:extracellular
 nucleus: 21132161
endoplasmic reticulum: 23041469
endoplasmic reticulum: 27224218
mitochondrion: 27780359
endoplasmic reticulum: 28499913
nucleus: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 27780359 doi
G Mustafa, S Komatsu
Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
msms PMID: 23041469 doi
S Komatsu, R Kuji, Y Nanjo, S Hiraga, K Furukawa
National Institute of Crop Science, Tsukuba 305-8518, Japan. skomatsu@affrc.go.jp
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH58057 Soybean mitochondrion 96.92 96.92
KRH77106 Soybean endoplasmic reticulum 78.46 77.74
KRH28377 Soybean endoplasmic reticulum 77.23 76.52
VIT_07s0129g00360.t01 Wine grape extracellular 75.38 74.02
Bra017830.1-P Field mustard cytosol 54.46 70.52
CDY29561 Canola extracellular 69.85 69.63
Solyc02g092580.2.1 Tomato extracellular 71.08 69.58
GSMUA_Achr10P... Banana extracellular 70.46 69.39
PGSC0003DMT400064270 Potato extracellular 70.77 69.28
PGSC0003DMT400038514 Potato extracellular 70.46 69.18
Bra011771.1-P Field mustard extracellular 69.23 69.02
CDX75661 Canola extracellular 69.23 69.02
Solyc03g044100.2.1 Tomato extracellular 69.85 68.58
CDX69313 Canola extracellular 68.62 68.4
Bra037849.1-P Field mustard extracellular 69.23 68.39
CDY18657 Canola extracellular 69.23 68.39
CDX72634 Canola extracellular 68.31 68.1
CDX81319 Canola extracellular 68.92 68.09
AT4G37520.1 Thale cress extracellular 67.69 66.87
KRH02841 Soybean extracellular 66.46 66.67
AT5G67400.1 Thale cress extracellular 67.38 66.57
AT4G37530.1 Thale cress extracellular 67.08 66.26
KRH19050 Soybean endoplasmic reticulum 65.85 66.05
AT3G49960.1 Thale cress extracellular 66.46 65.65
KRH04962 Soybean extracellular 64.31 64.11
Os07t0115300-01 Rice extracellular 64.92 63.94
KRH37292 Soybean endoplasmic reticulum 64.31 63.72
Os03t0762400-01 Rice extracellular 63.38 63.58
TraesCS2A01G263500.1 Wheat extracellular 62.77 63.16
CDY43573 Canola extracellular 56.92 62.93
TraesCS2B01G278500.1 Wheat extracellular 62.46 62.85
TraesCS2D01G260300.1 Wheat extracellular 62.46 62.85
Bra031832.1-P Field mustard mitochondrion 64.31 62.39
CDY37853 Canola mitochondrion 64.31 62.39
EER93405 Sorghum extracellular 60.62 60.43
HORVU5Hr1G097260.1 Barley extracellular 60.31 60.31
TraesCS5A01G400600.1 Wheat extracellular 60.0 60.0
TraesCS5D01G410600.1 Wheat extracellular 60.0 60.0
TraesCS5B01G405400.1 Wheat extracellular 59.69 59.69
Zm00001d005279_P001 Maize extracellular 47.38 59.0
KRH12267 Soybean extracellular 61.23 58.7
KRG94535 Soybean extracellular 58.46 58.1
Zm00001d007952_P001 Maize extracellular 60.0 58.04
CDX69314 Canola extracellular 57.85 57.67
KRH06936 Soybean extracellular 57.85 57.67
EER95758 Sorghum cytosol 14.15 56.1
Zm00001d034129_P001 Maize plasma membrane 60.31 55.06
HORVU2Hr1G063460.4 Barley mitochondrion 63.69 54.91
TraesCS5D01G410500.1 Wheat extracellular 52.92 53.42
HORVU6Hr1G020950.1 Barley extracellular 44.0 53.36
TraesCS5B01G405300.1 Wheat extracellular 52.31 53.12
TraesCS7A01G428400.1 Wheat extracellular 51.69 53.0
TraesCS7B01G328600.1 Wheat extracellular 51.38 52.85
TraesCS7D01G420800.1 Wheat extracellular 51.38 52.68
TraesCS5A01G400500.1 Wheat extracellular 51.69 52.5
HORVU6Hr1G005540.1 Barley extracellular 50.15 52.24
EER93406 Sorghum extracellular, plastid 53.54 52.1
TraesCS6B01G042600.1 Wheat extracellular 50.15 52.08
HORVU7Hr1G098560.3 Barley extracellular 50.46 51.73
Os06t0695300-01 Rice extracellular 49.85 51.59
Os06t0695200-00 Rice extracellular 49.54 51.27
EER88883 Sorghum mitochondrion 52.92 51.19
EER90297 Sorghum extracellular 49.54 50.79
Os03t0762300-01 Rice extracellular 52.0 50.6
Zm00001d034128_P001 Maize extracellular, plasma membrane 51.69 50.45
Zm00001d014601_P001 Maize extracellular 49.85 50.31
Zm00001d013212_P001 Maize extracellular, vacuole 50.77 50.3
Os04t0656800-01 Rice extracellular 51.38 50.3
TraesCS7A01G428200.1 Wheat extracellular, golgi 52.92 50.29
TraesCS6B01G042500.1 Wheat extracellular 49.54 50.16
Zm00001d014608_P002 Maize extracellular 51.08 50.15
HORVU2Hr1G111610.2 Barley extracellular 50.46 50.0
TraesCS2D01G502600.1 Wheat extracellular 50.46 50.0
TraesCS7B01G328400.1 Wheat mitochondrion 52.92 50.0
TraesCS7D01G420500.1 Wheat mitochondrion 52.31 49.85
Os06t0695500-01 Rice extracellular 51.69 49.85
TraesCS2A01G502100.1 Wheat extracellular 50.15 49.7
TraesCS2B01G530200.1 Wheat extracellular 50.15 49.7
Zm00001d002004_P003 Maize extracellular 50.46 49.4
Os06t0695400-01 Rice extracellular 48.31 49.22
EES13003 Sorghum extracellular 50.46 48.66
EER88881 Sorghum extracellular 47.08 48.11
Zm00001d014603_P001 Maize extracellular 47.08 47.81
EER88880 Sorghum extracellular 46.46 47.19
Zm00001d014606_P001 Maize extracellular 45.23 46.37
KRH16131 Soybean endoplasmic reticulum, plasma membrane 35.38 45.63
KRH18583 Soybean endoplasmic reticulum 40.92 41.96
KRG93402 Soybean extracellular 41.54 41.8
KRH34676 Soybean extracellular 42.15 41.52
KRH45758 Soybean extracellular 41.23 41.49
Zm00001d014602_P001 Maize extracellular, plasma membrane, vacuole 38.77 41.18
KRG92108 Soybean extracellular 41.23 41.1
KRG99232 Soybean cytosol, mitochondrion, plastid 35.08 40.14
KRH20350 Soybean extracellular 42.46 39.54
OQU88320 Sorghum extracellular, plasma membrane, vacuole 46.77 39.38
KRH12713 Soybean extracellular, vacuole 24.62 39.22
TraesCS6A01G029800.2 Wheat extracellular 50.77 38.28
KRH52303 Soybean extracellular, vacuole 38.15 38.04
KRH15691 Soybean extracellular 36.31 35.87
KRH05338 Soybean extracellular 36.31 35.76
HORVU5Hr1G098630.2 Barley cytosol 32.0 35.74
KRH50144 Soybean cytosol 14.15 33.58
KRH61638 Soybean cytosol 15.69 33.12
TraesCS6D01G034200.1 Wheat extracellular, golgi, plasma membrane 49.54 31.02
HORVU5Hr1G097270.3 Barley plastid 32.0 29.38
Protein Annotations
KEGG:00940+1.11.1.7Gene3D:1.10.420.10Gene3D:1.10.520.10EntrezGene:100819937MapMan:35.1EMBL:ACUP02010417
EnsemblPlantsGene:GLYMA_17G163200GO:GO:0003674GO:GO:0003824GO:GO:0004601GO:GO:0005488GO:GO:0005575
GO:GO:0005576GO:GO:0006950GO:GO:0006979GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009987GO:GO:0016491GO:GO:0020037GO:GO:0042744GO:GO:0046872GO:GO:0055114
GO:GO:0098869InterPro:Haem_peroxidaseInterPro:Haem_peroxidase_pln/fun/bacUniProt:I1MVN5InterPro:IPR002016EnsemblPlants:KRH04463
ProteinID:KRH04463ProteinID:KRH04463.1PFAM:PF00141PRINTS:PR00458PRINTS:PR00461ScanProsite:PS00435
ScanProsite:PS00436PFscan:PS50873PANTHER:PTHR31517PANTHER:PTHR31517:SF10MetaCyc:PWY-5461MetaCyc:PWY-5466
MetaCyc:PWY-5469MetaCyc:PWY-6824MetaCyc:PWY-7214MetaCyc:PWY-7445InterPro:Peroxidase_plnInterPro:Peroxidases_AS
InterPro:Peroxidases_heam-ligand_BSSUPFAM:SSF48113InterPro:Secretory_peroxidaseSignalP:SignalP-noTMUniParc:UPI000233EDBESEG:seg
Description
hypothetical protein
Coordinates
chr17:-:14529634..14532913
Molecular Weight (calculated)
35515.4 Da
IEP (calculated)
9.253
GRAVY (calculated)
-0.133
Length
325 amino acids
Sequence
(BLAST)
001: MGRLNLLLVW SLSLTLSLYY LHPISAQLSP NHYAKTCPNL ESIVRQAVTK KFQQTFVTVP ATLRLFFHDC FVQGCDASVL IASTGNNQAE KDHPDNLSLA
101: GDGFDTVIKA KAAVDAIPQC RNKVSCADIL ALATRDVIAL SGGPSYTVEL GRFDGLVSRT SDVNGRLPQP TNNLNQLNSL FAANGLTQTD MIALSGAHTL
201: GFSHCSKFAS RIYSTPVDPT LNKQYVAQLQ QMCPRNVDPR IAINMDPTTP RKFDNVYYQN LQQGKGLFTS DQILFTDPRS RNTVNSFASS SNVFNSNFVA
301: AMTKLGRVGV KTARNGKIRT DCSVL
Best Arabidopsis Sequence Match ( AT5G67400.1 )
(BLAST)
001: MARFSLVVVV TLSLAISMFP DTTTAQLKTN FYGNSCPNVE QIVKKVVQEK IKQTFVTIPA TLRLFFHDCF VNGCDASVMI QSTPTNKAEK DHPDNISLAG
101: DGFDVVIKAK KALDAIPSCK NKVSCADILA LATRDVVVAA KGPSYAVELG RFDGLVSTAA SVNGNLPGPN NKVTELNKLF AKNKLTQEDM IALSAAHTLG
201: FAHCGKVFNR IYNFNLTHAV DPTLNKAYAK ELQLACPKTV DPRIAINMDP TTPRQFDNIY FKNLQQGKGL FTSDQVLFTD GRSKPTVNDW AKNSVAFNKA
301: FVTAMTKLGR VGVKTRRNGN IRRDCGAFN
Arabidopsis Description
PER73Peroxidase [Source:UniProtKB/TrEMBL;Acc:A3KPG1]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.