Factsheet for Zm00001d002004_P003

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

extracellular: 20408568
mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13003	Sorghum	extracellular	94.28	92.88
Os04t0656800-01	Rice	extracellular	89.16	89.16
TraesCS2A01G502100.1	Wheat	extracellular	83.73	84.76
TraesCS2B01G530200.1	Wheat	extracellular	83.13	84.15
TraesCS2D01G502600.1	Wheat	extracellular	83.13	84.15
HORVU2Hr1G111610.2	Barley	extracellular	83.13	84.15
Zm00001d014608_P002	Maize	extracellular	66.27	66.47
GSMUA_Achr10P...	Banana	extracellular	50.6	50.91
CDX81319	Canola	extracellular	50.3	50.76
KRH58057	Soybean	mitochondrion	49.4	50.46
KRH04463	Soybean	endoplasmic reticulum	49.4	50.46
AT5G67400.1	Thale cress	extracellular	50.0	50.46
Bra037849.1-P	Field mustard	extracellular	50.0	50.46
CDY18657	Canola	extracellular	50.0	50.46
VIT_07s0129g00360.t01	Wine grape	extracellular	49.4	49.55
AT4G37520.1	Thale cress	extracellular	49.1	49.54
CDY43573	Canola	extracellular	43.67	49.32
CDX75661	Canola	extracellular	48.19	49.08
CDX69313	Canola	extracellular	48.19	49.08
Bra011771.1-P	Field mustard	extracellular	48.19	49.08
Bra017830.1-P	Field mustard	cytosol	37.05	49.0
Solyc03g044100.2.1	Tomato	extracellular	48.8	48.94
CDY29561	Canola	extracellular	47.89	48.77
Solyc02g092580.2.1	Tomato	extracellular	48.49	48.49
CDY37853	Canola	mitochondrion	48.8	48.36
Bra031832.1-P	Field mustard	mitochondrion	48.8	48.36
PGSC0003DMT400038514	Potato	extracellular	48.19	48.34
AT4G37530.1	Thale cress	extracellular	47.89	48.33
PGSC0003DMT400064270	Potato	extracellular	48.19	48.19
KRH77106	Soybean	endoplasmic reticulum	47.59	48.17
CDX72634	Canola	extracellular	46.99	47.85
AT3G49960.1	Thale cress	extracellular	47.29	47.72
KRH28377	Soybean	endoplasmic reticulum	46.99	47.56
Zm00001d014601_P001	Maize	extracellular	46.08	47.52
Zm00001d014603_P001	Maize	extracellular	45.48	47.19
Zm00001d007952_P001	Maize	extracellular	46.39	45.83
Zm00001d014606_P001	Maize	extracellular	43.37	45.43
Zm00001d034129_P001	Maize	plasma membrane	47.89	44.66
Zm00001d031635_P001	Maize	mitochondrion, vacuole	45.18	44.51
CDX69314	Canola	extracellular	43.67	44.48
Zm00001d006097_P001	Maize	extracellular	43.98	43.58
Zm00001d034128_P001	Maize	extracellular, plasma membrane	43.37	43.24
Zm00001d013212_P001	Maize	extracellular, vacuole	42.47	42.99
Zm00001d005279_P001	Maize	extracellular	33.13	42.15
Zm00001d014602_P001	Maize	extracellular, plasma membrane, vacuole	35.24	38.24
Zm00001d052285_P001	Maize	extracellular	40.66	37.82
Zm00001d017996_P001	Maize	extracellular	40.36	37.02
Zm00001d043938_P001	Maize	extracellular, golgi, mitochondrion	41.27	36.83
Zm00001d003381_P001	Maize	cytosol, mitochondrion	39.76	32.27
Zm00001d025774_P003	Maize	extracellular	37.05	25.41

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	EntrezGene:100274427	MapMan:35.1	UniProt:B4G0X5
EMBL:BT043013	EMBL:BT087352	EMBL:EU970310	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601
GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037	GO:GO:0042744
GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016
ProteinID:ONM12746.1	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	ScanProsite:PS00436
PFscan:PS50873	PANTHER:PTHR31517	PANTHER:PTHR31517:SF32	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS
SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0000050312	EnsemblPlantsGene:Zm00001d002004
EnsemblPlants:Zm00001d002004_P003	EnsemblPlants:Zm00001d002004_T003	SEG:seg	:	:	:

Description

Peroxidase 16

Coordinates

chr2:+:4177405..4180100

Molecular Weight (calculated)

35438.8 Da

IEP (calculated)

9.454

GRAVY (calculated)

0.111

Length

332 amino acids

Sequence
(BLAST)

001: MARAGGGGPV RGAALVVVLL GIVVGAARAQ LRQNYYGSSC PSAESTVRSV ISQRLQQSFA VGPGTLRLFF HDCFVRGCDA SVMLMAPNGD DESHSGADAT
101: LSPDAVDAIN KAKAAVEALP GCAGKVSCAD ILAMAARDVV SLLGGPSYGV ELGRLDGKTF NRAIVKHVLP GPGFNLDQLN ALFAQNGLTQ TDMIALSGAH
201: TIGVTHCDKF VRRIYTFKQR LAWNPPMNLD FLRSLRRVCP LSYSPTAFAM LDVTTPRVFD NAYFNNLRYN KGLLASDQVL FTDRRSRPTV NLFAANATAF
301: YEAFVAAMAK LGRIGLKTGA DGEIRRVCTA VN

Best Arabidopsis Sequence Match ( AT2G18980.1 )
(BLAST)

001: MKNQSSFSIV ALLLIFFSSS VFAQLQTNFY RKSCPNVETI VRNAVRQKFQ QTFVTAPATL RLFFHDCFVR GCDASILLAS PSEKDHPDDK SLAGDGFDTV
101: AKAKQALDRD PNCRNKVSCA DILALATRDV VVLTGGPNYP VELGRRDGRL STVASVQHSL PQPSFKLDQL NTMFARHGLS QTDMIALSGA HTIGFAHCGK
201: FSKRIYNFSP KRPIDPTLNI RYALQLRQMC PIRVDLRIAI NMDPTSPNTF DNAYFKNLQK GMGLFTSDQV LFSDERSRST VNSFASSEAT FRQAFISAIT
301: KLGRVGVKTG NAGEIRRDCS RVN

Arabidopsis Description

PER16Peroxidase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q96518]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.