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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • nucleus 1
  • cytosol 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
extracellular: 22313117
msms PMID: 22313117 doi
S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto
Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc02g092580.2.1 Tomato extracellular 99.1 99.1
PGSC0003DMT400038514 Potato extracellular 81.02 81.27
VIT_07s0129g00360.t01 Wine grape extracellular 74.1 74.32
KRH58057 Soybean mitochondrion 69.88 71.38
KRH04463 Soybean endoplasmic reticulum 69.28 70.77
GSMUA_Achr10P... Banana extracellular 68.98 69.39
KRH28377 Soybean endoplasmic reticulum 66.87 67.68
Bra017830.1-P Field mustard cytosol 50.9 67.33
KRH77106 Soybean endoplasmic reticulum 66.27 67.07
AT5G67400.1 Thale cress extracellular 65.96 66.57
AT4G37530.1 Thale cress extracellular 65.66 66.26
CDY29561 Canola extracellular 65.06 66.26
CDX72634 Canola extracellular 63.86 65.03
Bra037849.1-P Field mustard extracellular 64.16 64.74
CDY18657 Canola extracellular 64.16 64.74
Bra011771.1-P Field mustard extracellular 63.55 64.72
CDX75661 Canola extracellular 63.55 64.72
CDX81319 Canola extracellular 63.86 64.44
CDX69313 Canola extracellular 63.25 64.42
AT4G37520.1 Thale cress extracellular 63.55 64.13
PGSC0003DMT400052215 Potato extracellular 62.65 64.0
AT3G49960.1 Thale cress extracellular 63.25 63.83
PGSC0003DMT400010469 Potato extracellular 62.95 63.53
Os07t0115300-01 Rice extracellular 62.65 63.03
TraesCS5D01G410600.1 Wheat extracellular 61.45 62.77
Bra031832.1-P Field mustard mitochondrion 63.25 62.69
CDY37853 Canola mitochondrion 63.25 62.69
Os03t0762400-01 Rice extracellular 61.14 62.65
TraesCS5A01G400600.1 Wheat extracellular 61.14 62.46
TraesCS5B01G405400.1 Wheat extracellular 60.84 62.15
CDY43573 Canola extracellular 54.82 61.9
HORVU5Hr1G097260.1 Barley extracellular 60.24 61.54
EER93405 Sorghum extracellular 59.34 60.43
TraesCS2A01G263500.1 Wheat extracellular 57.83 59.44
TraesCS2D01G260300.1 Wheat extracellular 57.53 59.13
TraesCS2B01G278500.1 Wheat extracellular 57.53 59.13
Zm00001d005279_P001 Maize extracellular 46.08 58.62
EER95758 Sorghum cytosol 14.46 58.54
Zm00001d007952_P001 Maize extracellular 58.43 57.74
CDX69314 Canola extracellular 56.02 57.06
PGSC0003DMT400075962 Potato extracellular, golgi 56.93 56.25
HORVU6Hr1G020950.1 Barley extracellular 44.28 54.85
Zm00001d034129_P001 Maize plasma membrane 58.43 54.49
EER93406 Sorghum extracellular, plastid 54.22 53.89
TraesCS5B01G405300.1 Wheat extracellular 51.81 53.75
TraesCS5D01G410500.1 Wheat extracellular 51.81 53.42
Os03t0762300-01 Rice extracellular 53.61 53.29
TraesCS5A01G400500.1 Wheat extracellular 51.2 53.12
Zm00001d013212_P001 Maize extracellular, vacuole 52.41 53.05
Zm00001d034128_P001 Maize extracellular, plasma membrane 51.51 51.35
HORVU2Hr1G063460.4 Barley mitochondrion 58.13 51.19
TraesCS7D01G420800.1 Wheat extracellular 48.49 50.79
HORVU6Hr1G005540.1 Barley extracellular 47.59 50.64
TraesCS7B01G328600.1 Wheat extracellular 48.19 50.63
TraesCS6B01G042600.1 Wheat extracellular 47.29 50.16
TraesCS7A01G428400.1 Wheat extracellular 47.89 50.16
TraesCS6B01G042500.1 Wheat extracellular 48.49 50.16
Os06t0695300-01 Rice extracellular 47.29 50.0
HORVU7Hr1G098560.3 Barley extracellular 47.29 49.53
TraesCS2A01G502100.1 Wheat extracellular 48.8 49.39
TraesCS2B01G530200.1 Wheat extracellular 48.8 49.39
Os06t0695200-00 Rice extracellular 46.69 49.36
Os04t0656800-01 Rice extracellular 49.1 49.1
TraesCS2D01G502600.1 Wheat extracellular 48.19 48.78
EER88881 Sorghum extracellular 46.39 48.43
Zm00001d014608_P002 Maize extracellular 48.19 48.34
Os06t0695400-01 Rice extracellular 46.39 48.28
Zm00001d002004_P003 Maize extracellular 48.19 48.19
HORVU2Hr1G111610.2 Barley extracellular 47.59 48.17
Zm00001d014603_P001 Maize extracellular 46.39 48.12
EER90297 Sorghum extracellular 45.78 47.95
Zm00001d014601_P001 Maize extracellular 46.39 47.83
EER88883 Sorghum mitochondrion 48.19 47.62
EER88880 Sorghum extracellular 45.78 47.5
EES13003 Sorghum extracellular 48.19 47.48
TraesCS7A01G428200.1 Wheat extracellular, golgi 48.8 47.37
TraesCS7D01G420500.1 Wheat mitochondrion 48.19 46.92
TraesCS7B01G328400.1 Wheat mitochondrion 48.49 46.8
Os06t0695500-01 Rice extracellular 47.29 46.59
Zm00001d014606_P001 Maize extracellular 42.77 44.8
PGSC0003DMT400001375 Potato extracellular 43.67 44.21
PGSC0003DMT400027831 Potato extracellular 31.93 41.9
PGSC0003DMT400059099 Potato extracellular 31.93 41.9
PGSC0003DMT400040260 Potato extracellular 40.96 40.6
PGSC0003DMT400027833 Potato cytosol 12.05 40.4
PGSC0003DMT400052807 Potato extracellular 38.25 39.81
Zm00001d014602_P001 Maize extracellular, plasma membrane, vacuole 36.45 39.54
OQU88320 Sorghum extracellular, plasma membrane, vacuole 42.17 36.27
TraesCS6A01G029800.2 Wheat extracellular 46.99 36.19
HORVU5Hr1G098630.2 Barley cytosol 31.33 35.74
TraesCS6D01G034200.1 Wheat extracellular, golgi, plasma membrane 47.29 30.25
HORVU5Hr1G097270.3 Barley plastid 30.42 28.53
Protein Annotations
KEGG:00940+1.11.1.7Gene3D:1.10.420.10Gene3D:1.10.520.10EntrezGene:102592844MapMan:35.1GO:GO:0003674
GO:GO:0003824GO:GO:0004601GO:GO:0005488GO:GO:0005575GO:GO:0005576GO:GO:0006950
GO:GO:0006979GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016491
GO:GO:0020037GO:GO:0042744GO:GO:0046872GO:GO:0055114GO:GO:0098869InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bacInterPro:IPR002016UniProt:M1CC22PFAM:PF00141EnsemblPlantsGene:PGSC0003DMG400024967PGSC:PGSC0003DMG400024967
EnsemblPlants:PGSC0003DMT400064270PRINTS:PR00458PRINTS:PR00461ScanProsite:PS00435ScanProsite:PS00436PFscan:PS50873
PANTHER:PTHR31517PANTHER:PTHR31517:SF10InterPro:Peroxidase_plnInterPro:Peroxidases_ASInterPro:Peroxidases_heam-ligand_BSSUPFAM:SSF48113
InterPro:Secretory_peroxidaseSignalP:SignalP-noTMUniParc:UPI000294DE05RefSeq:XP_006339817.1SEG:seg:
Description
Peroxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400024967]
Coordinates
chr2:-:43038179..43040566
Molecular Weight (calculated)
36392.6 Da
IEP (calculated)
9.389
GRAVY (calculated)
-0.198
Length
332 amino acids
Sequence
(BLAST)
001: MGRLNLLMSV LLSIFSVSIV LMPNLASAQL KTNYYANICP NVESIVRNVV NQKFKQTFVT VPAVLRLFFH DCFVEGCDAS VIVSSTPGNT AEKDHSDNLS
101: LAGDGFDTVI KAKAAVDSNS RCKNKVSCAD ILALATRDVI QLSGGPWYPV ELGRLDGFTS KASNVEGKLP KPTFNLNQLN SMFASHGLTQ ADMIALSAAH
201: SVGFSHCGKF SNRIYNFSPQ NPIDPTLNKQ YAAQLQGMCP RNVDPRIAID MDPKTPRTFD NNYYKNLQQG MGLFTSDQVL YTDKRSKGTV DLWASNSKSF
301: QNAFTTAMTK LGRVGVKTGR NGNIRFDCGR MN
Best Arabidopsis Sequence Match ( AT4G37530.1 )
(BLAST)
001: MVVMNKTNLL LLILSLFLAI NLSSAQLRGD FYAGTCPNVE QIVRNAVQKK IQQTFTTIPA TLRLYFHDCF VNGCDASVMI ASTNTNKAEK DHEDNLSLAG
101: DGFDTVIKAK EAVDAVPNCR NKVSCADILT MATRDVVNLA GGPQYAVELG RRDGLSSSAS SVTGKLPKPT FDLNQLNALF AENGLSPNDM IALSGAHTLG
201: FAHCTKVFNR LYNFNKTNNV DPTINKDYVT ELKASCPQNI DPRVAINMDP NTPRQFDNVY YKNLQQGKGL FTSDQVLFTD SRSKPTVDLW ANNGQLFNQA
301: FISSMIKLGR VGVKTGSNGN IRRDCGAFN
Arabidopsis Description
PER51Peroxidase 51 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZE7]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.