Factsheet for TraesCS6D01G034200.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	golgi
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G042600.1	Wheat	extracellular	53.95	89.46
TraesCS7D01G420800.1	Wheat	extracellular	45.66	74.76
Os06t0695400-01	Rice	extracellular	43.35	70.53
EER88880	Sorghum	extracellular	41.81	67.81
Zm00001d014603_P001	Maize	extracellular	41.62	67.5
TraesCS6A01G029800.2	Wheat	extracellular	55.88	67.29
EER88881	Sorghum	extracellular	41.04	66.98
Zm00001d014606_P001	Maize	extracellular	40.66	66.56
KRH58057	Soybean	mitochondrion	31.02	49.54
KRH04463	Soybean	endoplasmic reticulum	31.02	49.54
TraesCS2D01G502600.1	Wheat	extracellular	30.06	47.56
TraesCS2D01G260300.1	Wheat	extracellular	29.48	47.37
Solyc02g092580.2.1	Tomato	extracellular	30.25	47.29
PGSC0003DMT400064270	Potato	extracellular	30.25	47.29
VIT_07s0129g00360.t01	Wine grape	extracellular	30.06	47.13
TraesCS5D01G410600.1	Wheat	extracellular	29.48	47.08
PGSC0003DMT400038514	Potato	extracellular	29.87	46.83
AT3G49960.1	Thale cress	extracellular	29.67	46.81
TraesCS7D01G420500.1	Wheat	mitochondrion	30.44	46.33
GSMUA_Achr10P...	Banana	extracellular	29.29	46.06
CDX81319	Canola	extracellular	29.09	45.9
CDY29561	Canola	extracellular	28.71	45.71
Solyc03g044100.2.1	Tomato	extracellular	29.09	45.62
Bra017830.1-P	Field mustard	cytosol	21.97	45.42
Bra037849.1-P	Field mustard	extracellular	28.71	45.29
CDY18657	Canola	extracellular	28.71	45.29
AT4G37530.1	Thale cress	extracellular	28.71	45.29
Bra011771.1-P	Field mustard	extracellular	28.13	44.79
CDX75661	Canola	extracellular	28.13	44.79
CDX69313	Canola	extracellular	27.94	44.48
CDX72634	Canola	extracellular	27.94	44.48
AT4G37520.1	Thale cress	extracellular	28.13	44.38
KRH28377	Soybean	endoplasmic reticulum	27.94	44.21
TraesCS5D01G410500.1	Wheat	extracellular	27.36	44.1
AT5G67400.1	Thale cress	extracellular	27.94	44.07
KRH77106	Soybean	endoplasmic reticulum	27.75	43.9
CDY43573	Canola	extracellular	24.86	43.88
Bra031832.1-P	Field mustard	mitochondrion	28.13	43.58
CDY37853	Canola	mitochondrion	28.13	43.58
CDX69314	Canola	extracellular	26.78	42.64
TraesCS7D01G262400.1	Wheat	extracellular, golgi, vacuole	25.24	39.34
TraesCS2D01G327700.1	Wheat	golgi	24.08	37.2
TraesCS3D01G244200.1	Wheat	extracellular	22.93	33.33
TraesCS6D01G289300.1	Wheat	extracellular, plasma membrane	24.66	31.22
TraesCS2D01G353000.1	Wheat	extracellular	22.74	24.53

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0020037	GO:GO:0042744	GO:GO:0055114	InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435
ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31517	PANTHER:PTHR31517:SF21	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS
InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6D01G034200	EnsemblPlants:TraesCS6D01G034200.1
TIGR:cd00314	TIGR:cd00693	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6D:-:14288217..14293637

Molecular Weight (calculated)

56204.6 Da

IEP (calculated)

5.166

GRAVY (calculated)

-0.052

Length

519 amino acids

Sequence
(BLAST)

001: MANLGSLASL PAIVVVVEVA IFSSFAAAQL RPDYYASVCP NLEGIVRYSV KQSMVKSPIS APTTLRLFFH DCAVMGCDAS VMIISPTGDD EWRNHDDYSL
101: KPEGFQTILD AKAAVDSDPQ CRYKVSCADI IALAARESVS QSGGPNYTVE LGRYDGKIST RNSVMLPHVD DNLDSLNAFF YTLGLSQIDM IALSVLTKAV
201: QGVDPSMHSM AKLAAVVVVQ VAVISPFAAA QLRADYYAGV CPSLEAIVRS SVKQSMVKSP ISAPATLRLF FHDCAATGCD ASVMIISSTG DDENANDYTL
301: KLEGFQTILD AKAAVDSDPQ CRYKVSCADI IALATRESVS QSGGPNYTVE LGRYDRRKSM DRSVRLPHPG DNLDNLNAFF STLGLSQTDM IALSGGHTLG
401: AADCGFFKYR IGGKDQSMNP SFDAQLQGTC AKQNFAFLDD VTPIGFDNFY YRNLQNGRGL LGSDQVLYTD ERSRGTVDFY AANQGTFFSD FAVAMTKLGR
501: VRVKTAADGE IRRDCRYPN

Best Arabidopsis Sequence Match ( AT2G18980.1 )
(BLAST)

001: MKNQSSFSIV ALLLIFFSSS VFAQLQTNFY RKSCPNVETI VRNAVRQKFQ QTFVTAPATL RLFFHDCFVR GCDASILLAS PSEKDHPDDK SLAGDGFDTV
101: AKAKQALDRD PNCRNKVSCA DILALATRDV VVLTGGPNYP VELGRRDGRL STVASVQHSL PQPSFKLDQL NTMFARHGLS QTDMIALSGA HTIGFAHCGK
201: FSKRIYNFSP KRPIDPTLNI RYALQLRQMC PIRVDLRIAI NMDPTSPNTF DNAYFKNLQK GMGLFTSDQV LFSDERSRST VNSFASSEAT FRQAFISAIT
301: KLGRVGVKTG NAGEIRRDCS RVN

Arabidopsis Description

PER16Peroxidase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q96518]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.