CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular

Predictor Summary:

nucleus 1
plastid 4
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034128_P001	Maize	extracellular, plasma membrane	84.13	84.38
Os03t0762300-01	Rice	extracellular	72.16	72.16
TraesCS5B01G405300.1	Wheat	extracellular	67.66	70.62
TraesCS5D01G410500.1	Wheat	extracellular	67.66	70.19
TraesCS5A01G400500.1	Wheat	extracellular	66.77	69.69
HORVU6Hr1G020950.1	Barley	extracellular	54.79	68.28
EER95758	Sorghum	cytosol	14.97	60.98
GSMUA_Achr10P...	Banana	extracellular	53.59	54.24
PGSC0003DMT400064270	Potato	extracellular	53.89	54.22
Solyc02g092580.2.1	Tomato	extracellular	53.89	54.22
VIT_07s0129g00360.t01	Wine grape	extracellular	53.59	54.08
KRH58057	Soybean	mitochondrion	52.4	53.85
KRH04463	Soybean	endoplasmic reticulum	52.1	53.54
Bra037849.1-P	Field mustard	extracellular	52.1	52.89
CDY18657	Canola	extracellular	52.1	52.89
CDX81319	Canola	extracellular	51.8	52.58
PGSC0003DMT400038514	Potato	extracellular	51.2	51.66
CDX75661	Canola	extracellular	50.3	51.53
Bra011771.1-P	Field mustard	extracellular	50.3	51.53
AT4G37530.1	Thale cress	extracellular	50.6	51.37
Solyc03g044100.2.1	Tomato	extracellular	50.6	51.06
CDX69313	Canola	extracellular	49.7	50.92
AT5G67400.1	Thale cress	extracellular	50.0	50.76
CDY29561	Canola	extracellular	49.1	50.31
EER93405	Sorghum	extracellular	49.1	50.31
CDX72634	Canola	extracellular	48.8	50.0
KRH28377	Soybean	endoplasmic reticulum	49.1	50.0
AT4G37520.1	Thale cress	extracellular	49.1	49.85
AT3G49960.1	Thale cress	extracellular	49.1	49.85
Bra017830.1-P	Field mustard	cytosol	37.43	49.8
KRH77106	Soybean	endoplasmic reticulum	48.5	49.39
Bra031832.1-P	Field mustard	mitochondrion	49.1	48.96
CDY37853	Canola	mitochondrion	49.1	48.96
EES14190	Sorghum	extracellular, mitochondrion, vacuole	48.8	48.51
CDY43573	Canola	extracellular	42.52	48.3
OQU89751	Sorghum	extracellular	51.2	44.88
EER88883	Sorghum	mitochondrion	44.91	44.64
EER90297	Sorghum	extracellular	42.22	44.48
CDX69314	Canola	extracellular	43.41	44.48
EER88880	Sorghum	extracellular	41.92	43.75
EER88881	Sorghum	extracellular	41.02	43.08
EES13003	Sorghum	extracellular	41.32	40.95
OQU81730	Sorghum	extracellular, golgi	41.32	40.0
EES01229	Sorghum	extracellular, golgi	44.01	39.73
EES07282	Sorghum	extracellular	42.52	38.8
OQU75673	Sorghum	extracellular, mitochondrion	17.96	35.71
OQU88320	Sorghum	extracellular, plasma membrane, vacuole	39.82	34.46
OQU81880	Sorghum	plastid	37.72	33.51

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	EntrezGene:8086199	UniProt:C5X040
EnsemblPlants:EER93406	ProteinID:EER93406	ProteinID:EER93406.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601
GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037	GO:GO:0042744
GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016
PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	ScanProsite:PS00436	PFscan:PS50873
PANTHER:PTHR31517	PANTHER:PTHR31517:SF8	MetaCyc:PWY-5461	MetaCyc:PWY-5466	MetaCyc:PWY-5469	MetaCyc:PWY-6824
MetaCyc:PWY-7214	MetaCyc:PWY-7445	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	EnsemblPlantsGene:SORBI_3001G080300
SUPFAM:SSF48113	unigene:Sbi.3133	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A82CC2
RefSeq:XP_002466408.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:6195685..6197404

Molecular Weight (calculated)

35265.7 Da

IEP (calculated)

6.983

GRAVY (calculated)

-0.102

Length

334 amino acids

Sequence
(BLAST)

001: MARPSASSKA SSSSLVILAI VVAAASLAQP GAADLKLNYY ASTCPNVETI VRGAVQQRVQ ATIRTVGSTV RLFFHDCFVE GCDASVLIDS TPGNQAEKDA
101: SDNKSLAPEG FDTVRSAKAA VEAACPGTVS CADVLALATR DAISMSGGPF FQVELGRLDG LSSRASSVPG QLPEPNQTMD QLLAVFKAHG LDMSDLVALS
201: AAHSVGLAHC SKFANRLYSF QPGQPTDPTL NPKYAQFLQS KCPNGGADNL VLMDQASPAQ FDNQYYRNLQ DGGGLLGSDE LLYTDNRTRP MVDSLANSTA
301: AFNQAFADAI VRLGRVGVKS GRRGNIRKQC HVFN

Best Arabidopsis Sequence Match ( AT4G37520.1 )
(BLAST)

001: MVVVNKTNLL LLLLSLCLTL DLSSAQLRRN FYAGSCPNVE QIVRNAVQKK VQQTFTTIPA TLRLYFHDCF VNGCDASVMI ASTNNNKAEK DHEENLSLAG
101: DGFDTVIKAK EALDAVPNCR NKVSCADILT MATRDVVNLA GGPQYDVELG RLDGLSSTAA SVGGKLPHPT DDVNKLTSLF AKNGLSLNDM IALSGAHTLG
201: FAHCTKVFNR IYTFNKTTKV DPTVNKDYVT ELKASCPRNI DPRVAINMDP TTPRQFDNVY YKNLQQGKGL FTSDQVLFTD RRSKPTVDLW ANNGQLFNQA
301: FINSMIKLGR VGVKTGSNGN IRRDCGAFN

Arabidopsis Description

PER50Peroxidase 50 [Source:UniProtKB/Swiss-Prot;Acc:Q43731]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.