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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 2
  • nucleus 1
  • mitochondrion 3
  • extracellular 3
  • cytosol 1
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:plastid
EpiLoc:nucleus
iPSORT:mitochondrion
MultiLoc:extracellular
Plant-mPloc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
extracellular: 19038476
plastid: 27992503
msms PMID: 27992503 doi
S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
msms PMID: 19038476 doi
XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim
Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G420500.1 Wheat mitochondrion 85.76 84.75
EER88883 Sorghum mitochondrion 83.98 84.23
TraesCS7A01G428200.1 Wheat extracellular, golgi 85.16 83.92
TraesCS7B01G328400.1 Wheat mitochondrion 85.46 83.72
Zm00001d014608_P002 Maize extracellular 80.71 82.18
Os04t0656800-01 Rice extracellular 65.28 66.27
KRH04463 Soybean endoplasmic reticulum 49.85 51.69
KRH58057 Soybean mitochondrion 49.55 51.38
VIT_07s0129g00360.t01 Wine grape extracellular 49.85 50.76
Os06t0695300-01 Rice extracellular 47.18 50.64
AT3G49960.1 Thale cress extracellular 49.26 50.46
Os06t0695400-01 Rice extracellular 47.48 50.16
Bra037849.1-P Field mustard extracellular 48.96 50.15
CDY18657 Canola extracellular 48.96 50.15
CDX81319 Canola extracellular 48.66 49.85
GSMUA_Achr10P... Banana extracellular 48.66 49.7
KRH77106 Soybean endoplasmic reticulum 48.07 49.39
Solyc03g044100.2.1 Tomato extracellular 48.37 49.24
KRH28377 Soybean endoplasmic reticulum 47.77 49.09
AT5G67400.1 Thale cress extracellular 47.77 48.94
Os03t0762400-01 Rice extracellular 46.88 48.77
Os06t0695200-00 Rice extracellular 45.4 48.73
PGSC0003DMT400038514 Potato extracellular 47.77 48.64
CDY37853 Canola mitochondrion 48.07 48.36
Bra031832.1-P Field mustard mitochondrion 48.07 48.36
Os07t0115300-01 Rice extracellular 47.18 48.18
Os09t0507500-01 Rice extracellular 47.18 48.04
CDX69313 Canola extracellular 46.29 47.85
Bra011771.1-P Field mustard extracellular 46.29 47.85
CDX75661 Canola extracellular 46.29 47.85
Solyc02g092580.2.1 Tomato extracellular 46.88 47.59
AT4G37530.1 Thale cress extracellular 46.29 47.42
PGSC0003DMT400064270 Potato extracellular 46.59 47.29
CDY43573 Canola extracellular 40.95 46.94
CDY29561 Canola extracellular 45.1 46.63
AT4G37520.1 Thale cress extracellular 45.4 46.5
CDX72634 Canola extracellular 44.81 46.32
Bra017830.1-P Field mustard cytosol 34.12 45.82
Os08t0532700-01 Rice extracellular 45.7 45.43
CDX69314 Canola extracellular 42.14 43.56
Os06t0237600-00 Rice extracellular 40.65 41.9
Os03t0762300-01 Rice extracellular 40.36 40.72
Os04t0465100-01 Rice extracellular 39.47 39.7
Os02t0741200-01 Rice plasma membrane 40.65 30.44
Os04t0498700-01 Rice extracellular, golgi, mitochondrion, vacuole 35.91 23.82
Protein Annotations
KEGG:00940+1.11.1.7Gene3D:1.10.420.10Gene3D:1.10.520.10MapMan:35.1EntrezGene:4341935EMBL:AK064918
EMBL:AK104754ProteinID:BAD53901.1ProteinID:BAF20364.1ProteinID:BAS99281.1ProteinID:CAH69332.1ProteinID:EAZ38136.1
GO:GO:0003674GO:GO:0003824GO:GO:0004601GO:GO:0005488GO:GO:0005575GO:GO:0005576
GO:GO:0006950GO:GO:0006979GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987
GO:GO:0016491GO:GO:0020037GO:GO:0042744GO:GO:0046872GO:GO:0055114GO:GO:0098869
InterPro:Haem_peroxidaseInterPro:Haem_peroxidase_pln/fun/bacInterPro:IPR002016EnsemblPlantsGene:Os06g0695500EnsemblPlants:Os06t0695500-01PFAM:PF00141
PRINTS:PR00458PRINTS:PR00461ScanProsite:PS00435ScanProsite:PS00436PFscan:PS50873PFscan:PS51257
PANTHER:PTHR31517PANTHER:PTHR31517:SF10InterPro:Peroxidase_plnInterPro:Peroxidases_ASInterPro:Peroxidases_heam-ligand_BSUniProt:Q5Z8H5
SUPFAM:SSF48113InterPro:Secretory_peroxidaseSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000015C573RefSeq:XP_015640929.1
SEG:seg:::::
Description
class III peroxidase 90Similar to Peroxidase 16 precursor (EC 1.11.1.7) (Atperox P16) (ATP22a). (Os06t0695500-01)
Coordinates
chr6:+:29051012..29054304
Molecular Weight (calculated)
36067.2 Da
IEP (calculated)
9.093
GRAVY (calculated)
-0.004
Length
337 amino acids
Sequence
(BLAST)
001: MGQRRRSGPR RQSQSVVVVV VAVLLATASC AAAQLSQSYY ASTCPNVETL VRGAVTQKLK ETFNAAPGTL RLFFHDCFVR GCDASVLIAG PDDEHSAGAD
101: TTLSPDALDL ITRAKAAVDA DAQCANKVSC ADILALAARD VVSQAGGPYY QVELGRLDGK VGTRAVVKHS LPGAAFDLDQ LNKLFATNGL TQTDMIALSG
201: GHTIGVTHCD KFVRRLYQFK GAAPQYSPPM NLAFLRQMRQ TCPLSYSPTT VAMLDAVSPN KFDNGYFQTL QQLKGLLASD QVLFADRRSR ATVNYFAANQ
301: TAFFDAFVAA ITKLGRVGVK TAAGSDAEIR RVCTKVN
Best Arabidopsis Sequence Match ( AT2G18980.1 )
(BLAST)
001: MKNQSSFSIV ALLLIFFSSS VFAQLQTNFY RKSCPNVETI VRNAVRQKFQ QTFVTAPATL RLFFHDCFVR GCDASILLAS PSEKDHPDDK SLAGDGFDTV
101: AKAKQALDRD PNCRNKVSCA DILALATRDV VVLTGGPNYP VELGRRDGRL STVASVQHSL PQPSFKLDQL NTMFARHGLS QTDMIALSGA HTIGFAHCGK
201: FSKRIYNFSP KRPIDPTLNI RYALQLRQMC PIRVDLRIAI NMDPTSPNTF DNAYFKNLQK GMGLFTSDQV LFSDERSRST VNSFASSEAT FRQAFISAIT
301: KLGRVGVKTG NAGEIRRDCS RVN
Arabidopsis Description
PER16Peroxidase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q96518]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.