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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • plastid 2
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:secretory
EpiLoc:plastid
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:extracellular
extracellular: 19038476
plastid: 27992503
msms PMID: 27992503 doi
S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
msms PMID: 19038476 doi
XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim
Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU0Hr1G004850.1 Barley cytosol 44.78 81.52
TraesCS2B01G346800.1 Wheat extracellular 81.49 81.49
TraesCS2D01G327700.1 Wheat golgi 81.49 81.25
TraesCS2A01G333500.1 Wheat extracellular 81.49 81.25
OQU81730 Sorghum extracellular, golgi 79.4 77.1
Zm00001d003381_P001 Maize cytosol, mitochondrion 76.12 62.35
GSMUA_Achr9P28150_001 Banana extracellular 52.24 57.38
GSMUA_Achr3P10350_001 Banana extracellular 52.24 56.63
GSMUA_Achr9P18240_001 Banana extracellular 56.42 56.59
VIT_14s0066g01850.t01 Wine grape extracellular 53.73 55.73
GSMUA_Achr8P25850_001 Banana extracellular 55.52 55.69
Solyc02g087190.1.1 Tomato extracellular 54.03 55.18
Os06t0237600-00 Rice extracellular 53.43 54.74
PGSC0003DMT400001375 Potato extracellular 53.13 54.27
VIT_17s0000g07750.t01 Wine grape extracellular 52.54 53.82
Bra017514.1-P Field mustard cytosol 30.45 53.12
CDY67106 Canola cytosol 30.45 53.12
CDY44591 Canola extracellular 50.45 52.65
Bra025604.1-P Field mustard extracellular 50.15 52.34
AT3G28200.1 Thale cress extracellular 48.96 51.9
CDY53111 Canola extracellular 49.85 51.86
KRH18583 Soybean endoplasmic reticulum 48.96 51.73
CDY03169 Canola extracellular, golgi 50.45 51.68
Bra022090.1-P Field mustard extracellular, golgi 51.04 51.66
Bra012649.1-P Field mustard cytosol 23.88 51.61
CDY00136 Canola extracellular 49.55 51.23
AT4G17690.1 Thale cress extracellular 49.85 51.23
KRG93402 Soybean extracellular 49.25 51.08
Bra039059.1-P Field mustard extracellular 49.55 50.92
VIT_01s0026g00830.t01 Wine grape extracellular 49.55 50.61
AT5G47000.1 Thale cress extracellular 50.45 50.6
CDY71675 Canola extracellular 38.81 50.19
CDY20027 Canola extracellular 44.48 50.17
CDY47236 Canola extracellular 47.76 50.16
Bra033040.1-P Field mustard extracellular 47.76 50.16
CDX77727 Canola extracellular 39.1 50.0
Bra024972.1-P Field mustard extracellular 39.1 50.0
CDY33506 Canola extracellular 39.1 50.0
CDY43637 Canola extracellular 39.1 49.81
CDY37169 Canola extracellular 39.1 49.81
CDX90457 Canola extracellular 48.36 49.24
AT5G40150.1 Thale cress extracellular 48.06 49.09
KRH45758 Soybean extracellular 47.16 48.92
PGSC0003DMT400040260 Potato extracellular 48.66 48.66
KRH12713 Soybean extracellular, vacuole 29.55 48.53
CDY04014 Canola extracellular 47.76 47.9
Solyc05g006230.1.1 Tomato extracellular 47.76 47.76
AT1G24110.1 Thale cress extracellular 46.27 47.55
CDY60795 Canola extracellular 46.57 47.13
Os09t0507500-01 Rice extracellular 46.57 47.13
KRG99232 Soybean cytosol, mitochondrion, plastid 39.7 46.83
CDY16244 Canola extracellular 46.27 46.83
Bra024635.1-P Field mustard extracellular 46.27 46.83
KRG92108 Soybean extracellular 45.07 46.32
Solyc08g007150.1.1 Tomato extracellular 43.58 45.77
KRH34676 Soybean extracellular 44.78 45.45
PGSC0003DMT400052807 Potato extracellular 43.28 45.45
Os07t0115300-01 Rice extracellular 43.58 44.24
CDY09607 Canola extracellular, mitochondrion 48.96 43.16
Bra040175.1-P Field mustard extracellular 44.48 42.94
CDX74254 Canola extracellular 16.12 42.86
Os08t0532700-01 Rice extracellular 43.28 42.77
CDX78793 Canola extracellular 44.18 42.65
CDY38421 Canola extracellular 43.88 42.36
Os03t0762400-01 Rice extracellular 40.3 41.67
Os03t0762300-01 Rice extracellular 41.19 41.32
Os06t0695300-01 Rice extracellular 37.61 40.13
Os06t0695200-00 Rice extracellular 37.61 40.13
Os06t0695500-01 Rice extracellular 39.7 39.47
Os06t0695400-01 Rice extracellular 37.31 39.19
Os04t0656800-01 Rice extracellular 38.81 39.16
Os02t0741200-01 Rice plasma membrane 52.24 38.89
Os04t0498700-01 Rice extracellular, golgi, mitochondrion, vacuole 38.81 25.59
Protein Annotations
KEGG:00940+1.11.1.7Gene3D:1.10.420.10Gene3D:1.10.520.10MapMan:35.1EntrezGene:4336088EMBL:AK243216
ProteinID:BAF14937.1ProteinID:BAS89595.1ProteinID:CAE04363.1ProteinID:CAE04827.1ProteinID:CAH69297.1GO:GO:0003674
GO:GO:0003824GO:GO:0004601GO:GO:0005488GO:GO:0005575GO:GO:0005576GO:GO:0006950
GO:GO:0006979GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016491
GO:GO:0020037GO:GO:0042744GO:GO:0046872GO:GO:0055114GO:GO:0098869InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bacInterPro:IPR002016EnsemblPlantsGene:Os04g0465100EnsemblPlants:Os04t0465100-01PFAM:PF00141PRINTS:PR00458
PRINTS:PR00461ScanProsite:PS00435ScanProsite:PS00436PFscan:PS50873PANTHER:PTHR31517PANTHER:PTHR31517:SF14
InterPro:Peroxidase_plnInterPro:Peroxidases_ASInterPro:Peroxidases_heam-ligand_BSUniProt:Q7X8H7SUPFAM:SSF48113InterPro:Secretory_peroxidase
SignalP:SignalP-noTMUniParc:UPI00001B17D5RefSeq:XP_015634212.1SEG:seg::
Description
class III peroxidase 55Haem peroxidase, plant/fungal/bacterial family protein. (Os04t0465100-01)
Coordinates
chr4:-:23235808..23237158
Molecular Weight (calculated)
35565.7 Da
IEP (calculated)
9.314
GRAVY (calculated)
0.076
Length
335 amino acids
Sequence
(BLAST)
001: MGALLLRCAL LALAAGLVAA RGGGGGGAGA AGRLSPNYYR HSCPRVERIV ADVVAAKQRA NPSTAAGTLR LFFHDCFVGG CDASVLVSPL SADRSPERAA
101: EINLSLPGDS FDVVARAKVA LEVACPGTVS CADILALAAR DLVGILGGPR FPVALGRRDA RRSDARDVEG NLPRTNMSAR AMAVLFARKG FTPRELVALA
201: GAHTVGFSHC GEFAHRLYSF RSADGYDPSL NPAFARALQS SCANYRSDPT ISIFNDIMTP GKFDEVYFKN LPRGLGLLAS DAALWEYPAT RVFVQRYADN
301: RTAFFEDFAA AMQKLGAVGV KTGRQGVVRR HCDVL
Best Arabidopsis Sequence Match ( AT5G47000.1 )
(BLAST)
001: MSNMQFSRGF NPFVILFCLA VVAPIISADV AILRTDYYQK TCPDFHKIVR EAVTTKQVQQ PTTAAGTLRL FFHDCFLEGC DASVLIATNS FNKAERDDDL
101: NDSLPGDAFD IVTRIKTALE LSCPGVVSCA DILAQATRDL VTMVGGPYFD VKLGRKDGFE SKAHKVRGNV PMANQTVPDI HGIFKKNGFS LREMVALSGA
201: HTIGFSHCKE FSDRLYGSRA DKEINPRFAA ALKDLCKNHT VDDTIAAFND VMTPGKFDNM YFKNLKRGLG LLASDHILIK DNSTKPFVDL YATNETAFFE
301: DFARAMEKLG TVGVKGDKDG EVRRRCDHFN NLNV
Arabidopsis Description
PER65Peroxidase 65 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJR1]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.