CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43637	Canola	extracellular	100.0	73.0
CDY37169	Canola	extracellular	99.48	72.62
CDY71675	Canola	extracellular	97.4	72.2
CDX77727	Canola	extracellular	98.44	72.14
CDY33506	Canola	extracellular	97.4	71.37
CDY03169	Canola	extracellular, golgi	97.4	57.19
AT5G47000.1	Thale cress	extracellular	91.67	52.69
HORVU0Hr1G004850.1	Barley	cytosol	45.83	47.83
CDY64768	Canola	cytosol	9.38	43.9
CDX90457	Canola	extracellular	70.83	41.34
CDX78793	Canola	extracellular	66.15	36.6
CDY38421	Canola	extracellular	65.62	36.31
CDY09607	Canola	extracellular, mitochondrion	71.35	36.05
GSMUA_Achr9P18240_001	Banana	extracellular	60.42	34.73
PGSC0003DMT400040260	Potato	extracellular	58.85	33.73
VIT_01s0026g00830.t01	Wine grape	extracellular	56.77	33.23
Solyc05g006230.1.1	Tomato	extracellular	57.81	33.13
CDY20027	Canola	extracellular	51.04	33.0
GSMUA_Achr8P25850_001	Banana	extracellular	56.77	32.63
GSMUA_Achr9P28150_001	Banana	extracellular	50.52	31.8
GSMUA_Achr3P10350_001	Banana	extracellular	50.52	31.39
Os06t0237600-00	Rice	extracellular	53.12	31.19
CDY44591	Canola	extracellular	52.08	31.15
CDY53111	Canola	extracellular	51.56	30.75
CDY47236	Canola	extracellular	51.04	30.72
CDY00136	Canola	extracellular	51.56	30.56
Os04t0465100-01	Rice	extracellular	53.12	30.45
TraesCS6A01G309900.1	Wheat	extracellular	53.65	30.12
CDX69601	Canola	cytosol	41.15	29.92
CDY16244	Canola	extracellular	51.04	29.61
CDY60795	Canola	extracellular	51.04	29.61
Zm00001d052285_P001	Maize	extracellular	54.69	29.41
Zm00001d017996_P001	Maize	extracellular	55.21	29.28
TraesCS6B01G339700.1	Wheat	plastid	52.6	29.11
CDY04014	Canola	extracellular	50.52	29.04
TraesCS2D01G327700.1	Wheat	golgi	50.0	28.57
TraesCS2B01G346800.1	Wheat	extracellular	49.48	28.36
TraesCS2A01G333500.1	Wheat	extracellular	49.48	28.27
EES07282	Sorghum	extracellular	53.65	28.14
PGSC0003DMT400052807	Potato	extracellular	46.35	27.9
Solyc08g007150.1.1	Tomato	extracellular	46.35	27.9
CDY43573	Canola	extracellular	42.19	27.55
HORVU6Hr1G076470.2	Barley	extracellular, plasma membrane	54.17	27.23
OQU81730	Sorghum	extracellular, golgi	48.44	26.96
CDY17218	Canola	extracellular	42.71	25.79
CDY29561	Canola	extracellular	43.23	25.46
CDX72214	Canola	endoplasmic reticulum, extracellular	42.19	24.92
CDX72634	Canola	extracellular	42.19	24.85
CDX75661	Canola	extracellular	42.19	24.85
CDY58408	Canola	extracellular	41.67	24.84
TraesCS6D01G289300.1	Wheat	extracellular, plasma membrane	52.6	24.63
CDX81319	Canola	extracellular	42.19	24.62
CDY18657	Canola	extracellular	42.19	24.62
CDY37853	Canola	mitochondrion	42.71	24.48
CDY28166	Canola	extracellular	41.15	24.38
CDX69313	Canola	extracellular	41.15	24.23
CDX91081	Canola	extracellular	41.15	23.8
CDX69314	Canola	extracellular	40.1	23.62
Zm00001d003381_P001	Maize	cytosol, mitochondrion	48.96	22.98
Os02t0741200-01	Rice	plasma membrane	51.04	21.78
CDY34754	Canola	extracellular, vacuole	35.42	20.42
CDX76791	Canola	extracellular, vacuole	35.42	20.42
CDY71322	Canola	plastid	34.9	19.88
CDX85612	Canola	plasma membrane	39.58	19.14
CDY51649	Canola	extracellular	36.98	18.64
OQU75673	Sorghum	extracellular, mitochondrion	15.1	17.26
CDY66754	Canola	extracellular	40.1	16.35
CDY64769	Canola	extracellular	15.62	11.67
CDX91082	Canola	extracellular	0.52	1.43
CDX74254	Canola	extracellular	0.0	0.0

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:A0A078JMU6	UniProt:A0A078JMU6
EnsemblPlants:CDY67106	ProteinID:CDY67106	ProteinID:CDY67106.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601
GO:GO:0005488	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0020037	GO:GO:0055114	GO:GO:0098869	EnsemblPlantsGene:GSBRNA2T00058840001	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	PFscan:PS50873
PANTHER:PTHR31517	PANTHER:PTHR31517:SF17	MetaCyc:PWY-5461	MetaCyc:PWY-7214	MetaCyc:PWY-7445	InterPro:Peroxidase_pln
InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	UniParc:UPI0004EDFD5A	:	:	:

Description

BnaCnng53570DBnaCnng53570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JMU6]

Coordinates

chrLK035760:+:6762..7340

Molecular Weight (calculated)

21489.8 Da

IEP (calculated)

8.819

GRAVY (calculated)

-0.491

Length

192 amino acids

Sequence
(BLAST)

001: MVGGPYFDVK LGRKDGLESK AHKVRGNVPM PNQTVHDIHG MFKKNGFSLR EMVALSGAHT IGFSHCKEFS DRLYGSKADP EINPRFATAL KELCKNHTVD
101: DTIAAFNDVM TPGKFDNMYF KNLKRGLGLL ASDHLLIKNN STKPFVELYA TDEKAFFEDF ARAMEKMGTV GVKGDGEGEV RRRCDHFNNL NV

Best Arabidopsis Sequence Match ( AT1G24110.1 )
(BLAST)

001: MKSFGLCLFI LVSSPCLLQA NLSSDYYTKT CPEFEETLVQ IVTDKQIAAP TTAVGTLRLF FHDCMVDGCD ASILVASTPR KTSERDADIN RSLPGDAFDV
101: ITRIKTAVEL KCPNIVSCSD ILVGATRSLI SMVGGPRVNV KFGRKDSLVS DMNRVEGKLA RPNMTMDHII SIFESSGLTV QEMVALVGAH TIGFSHCKEF
201: ASRIFNKSDQ NGPVEMNPKY AAELRKLCAN YTNDEQMSAF NDVFTPGKFD NMYYKNLKHG YGLLQSDHAI AFDNRTRSLV DLYAEDETAF FDAFAKAMEK
301: VSEKNVKTGK LGEVRRRCDQ YNDYKG

Arabidopsis Description

PER6Peroxidase 6 [Source:UniProtKB/Swiss-Prot;Acc:O48677]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.