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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
MultiLoc:cytosol
TargetP:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G346800.1 Wheat extracellular 97.83 53.73
TraesCS2D01G327700.1 Wheat golgi 97.83 53.57
TraesCS2A01G333500.1 Wheat extracellular 97.83 53.57
Bra012649.1-P Field mustard cytosol 41.85 49.68
Bra017514.1-P Field mustard cytosol 47.83 45.83
CDY67106 Canola cytosol 47.83 45.83
Os04t0465100-01 Rice extracellular 81.52 44.78
OQU81730 Sorghum extracellular, golgi 77.17 41.16
Zm00001d003381_P001 Maize cytosol, mitochondrion 79.35 35.7
CDY71675 Canola extracellular 47.83 33.98
Bra024972.1-P Field mustard extracellular 48.37 33.97
CDY33506 Canola extracellular 48.37 33.97
CDX77727 Canola extracellular 48.37 33.97
CDY43637 Canola extracellular 47.83 33.46
CDY37169 Canola extracellular 47.83 33.46
HORVU0Hr1G013340.5 Barley plastid 44.02 32.27
HORVU3Hr1G065950.2 Barley mitochondrion, nucleus 33.7 31.47
GSMUA_Achr9P18240_001 Banana extracellular 55.98 30.84
GSMUA_Achr8P25850_001 Banana extracellular 54.35 29.94
VIT_14s0066g01850.t01 Wine grape extracellular 51.63 29.41
VIT_17s0000g07750.t01 Wine grape extracellular 52.17 29.36
CDY20027 Canola extracellular 47.28 29.29
VIT_01s0026g00830.t01 Wine grape extracellular 51.09 28.66
GSMUA_Achr9P28150_001 Banana extracellular 47.28 28.52
GSMUA_Achr3P10350_001 Banana extracellular 47.28 28.16
AT4G17690.1 Thale cress extracellular 49.46 27.91
KRG99232 Soybean cytosol, mitochondrion, plastid 42.93 27.82
KRG93402 Soybean extracellular 48.37 27.55
AT3G28200.1 Thale cress extracellular 47.28 27.53
Solyc02g087190.1.1 Tomato extracellular 48.91 27.44
CDY00136 Canola extracellular 47.83 27.16
KRH18583 Soybean endoplasmic reticulum 46.74 27.13
AT5G47000.1 Thale cress extracellular 48.91 26.95
CDY03169 Canola extracellular, golgi 47.83 26.91
PGSC0003DMT400001375 Potato extracellular 47.83 26.83
Bra039059.1-P Field mustard extracellular 47.28 26.69
Bra022090.1-P Field mustard extracellular, golgi 47.83 26.59
CDY44591 Canola extracellular 46.2 26.48
Bra025604.1-P Field mustard extracellular 45.65 26.17
CDX90457 Canola extracellular 46.74 26.14
CDY53111 Canola extracellular 45.65 26.09
AT1G24110.1 Thale cress extracellular 46.2 26.07
CDY47236 Canola extracellular 45.11 26.02
Bra033040.1-P Field mustard extracellular 45.11 26.02
AT5G40150.1 Thale cress extracellular 46.2 25.91
CDY60795 Canola extracellular 45.65 25.38
CDY04014 Canola extracellular 45.65 25.15
KRH45758 Soybean extracellular 44.02 25.08
CDY16244 Canola extracellular 45.11 25.08
Bra024635.1-P Field mustard extracellular 45.11 25.08
Solyc05g006230.1.1 Tomato extracellular 45.65 25.07
PGSC0003DMT400040260 Potato extracellular 45.65 25.07
KRG92108 Soybean extracellular 43.48 24.54
CDX78793 Canola extracellular 46.2 24.5
Bra040175.1-P Field mustard extracellular 46.2 24.5
PGSC0003DMT400052807 Potato extracellular 42.39 24.45
HORVU2Hr1G086160.3 Barley cytosol 34.24 24.23
CDY38421 Canola extracellular 45.65 24.21
Solyc08g007150.1.1 Tomato extracellular 41.85 24.14
HORVU6Hr1G076470.2 Barley extracellular, plasma membrane 48.91 23.56
KRH34676 Soybean extracellular 41.3 23.03
HORVU7Hr1G054510.1 Barley extracellular 41.3 22.75
CDY09607 Canola extracellular, mitochondrion 46.74 22.63
KRH12713 Soybean extracellular, vacuole 25.0 22.55
HORVU6Hr1G005540.1 Barley extracellular 38.04 22.44
HORVU2Hr1G111610.2 Barley extracellular 38.59 21.65
HORVU5Hr1G097260.1 Barley extracellular 37.5 21.23
HORVU7Hr1G098560.3 Barley extracellular 35.87 20.82
HORVU5Hr1G076710.7 Barley extracellular 35.87 20.75
HORVU2Hr1G063460.4 Barley mitochondrion 40.76 19.89
HORVU6Hr1G020950.1 Barley extracellular 26.63 18.28
HORVU3Hr1G060930.1 Barley mitochondrion 16.85 12.76
HORVU2Hr1G086120.3 Barley mitochondrion 33.7 12.4
HORVU5Hr1G098630.2 Barley cytosol 19.02 12.03
HORVU5Hr1G097270.3 Barley plastid 15.22 7.91
CDX74254 Canola extracellular 0.0 0.0
Protein Annotations
KEGG:00940+1.11.1.7Gene3D:1.10.420.10Gene3D:1.10.520.10MapMan:35.1UniProt:A0A287DVV4GO:GO:0003674
GO:GO:0003824GO:GO:0004601GO:GO:0005488GO:GO:0005575GO:GO:0005576GO:GO:0006950
GO:GO:0006979GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016491
GO:GO:0020037GO:GO:0042744GO:GO:0055114GO:GO:0098869EnsemblPlantsGene:HORVU0Hr1G004850EnsemblPlants:HORVU0Hr1G004850.1
InterPro:Haem_peroxidaseInterPro:Haem_peroxidase_pln/fun/bacInterPro:IPR002016PFAM:PF00141PRINTS:PR00458PRINTS:PR00461
ScanProsite:PS00435PFscan:PS50873PANTHER:PTHR31517PANTHER:PTHR31517:SF14InterPro:Peroxidase_plnInterPro:Peroxidases_heam-ligand_BS
SUPFAM:SSF48113UniParc:UPI000B48012DSEG:seg:::
Description
No Description!
Coordinates
chrchrUn:-:27947345..27948322
Molecular Weight (calculated)
20277.9 Da
IEP (calculated)
8.817
GRAVY (calculated)
-0.403
Length
184 amino acids
Sequence
(BLAST)
001: RRDARRSDAR DVEGNLPRTN MSARAMTVLF ARKGITPQEM VALAGAHTVG FSHCSEFAHR VYNYKGAGGA AGGHDPSLNP EFARALQSSC AGYESNPDIS
101: IFNDIVTPRD FDELYFKNLP RGLGLLASDA ALWEYPPTKV FVQQYADNRT AFFQDFAKAM QKLGTVGVKT GRQGVVRRQC DILD
Best Arabidopsis Sequence Match ( AT1G24110.1 )
(BLAST)
001: MKSFGLCLFI LVSSPCLLQA NLSSDYYTKT CPEFEETLVQ IVTDKQIAAP TTAVGTLRLF FHDCMVDGCD ASILVASTPR KTSERDADIN RSLPGDAFDV
101: ITRIKTAVEL KCPNIVSCSD ILVGATRSLI SMVGGPRVNV KFGRKDSLVS DMNRVEGKLA RPNMTMDHII SIFESSGLTV QEMVALVGAH TIGFSHCKEF
201: ASRIFNKSDQ NGPVEMNPKY AAELRKLCAN YTNDEQMSAF NDVFTPGKFD NMYYKNLKHG YGLLQSDHAI AFDNRTRSLV DLYAEDETAF FDAFAKAMEK
301: VSEKNVKTGK LGEVRRRCDQ YNDYKG
Arabidopsis Description
PER6Peroxidase 6 [Source:UniProtKB/Swiss-Prot;Acc:O48677]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.