Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 8
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY60795 | Canola | extracellular | 84.05 | 82.78 |
| CDY16244 | Canola | extracellular | 83.44 | 82.18 |
| Bra024635.1-P | Field mustard | extracellular | 83.44 | 82.18 |
| VIT_01s0026g00830.t01 | Wine grape | extracellular | 58.9 | 58.54 |
| KRG92108 | Soybean | extracellular | 54.6 | 54.6 |
| GSMUA_Achr3P10350_001 | Banana | extracellular | 50.31 | 53.07 |
| GSMUA_Achr8P25850_001 | Banana | extracellular | 54.29 | 52.99 |
| AT3G28200.1 | Thale cress | extracellular | 51.23 | 52.85 |
| KRH34676 | Soybean | extracellular | 53.37 | 52.73 |
| GSMUA_Achr9P18240_001 | Banana | extracellular | 53.99 | 52.69 |
| AT5G47000.1 | Thale cress | extracellular | 53.37 | 52.1 |
| AT4G17690.1 | Thale cress | extracellular | 51.84 | 51.84 |
| GSMUA_Achr9P28150_001 | Banana | extracellular | 48.16 | 51.48 |
| TraesCS6A01G309900.1 | Wheat | extracellular | 53.37 | 50.88 |
| AT5G40150.1 | Thale cress | extracellular | 50.31 | 50.0 |
| TraesCS6B01G339700.1 | Wheat | plastid | 52.45 | 49.28 |
| Os06t0237600-00 | Rice | extracellular | 48.77 | 48.62 |
| Zm00001d052285_P001 | Maize | extracellular | 52.15 | 47.62 |
| Zm00001d017996_P001 | Maize | extracellular | 51.84 | 46.69 |
| TraesCS2A01G333500.1 | Wheat | extracellular | 47.85 | 46.43 |
| TraesCS2B01G346800.1 | Wheat | extracellular | 47.55 | 46.27 |
| Os04t0465100-01 | Rice | extracellular | 47.55 | 46.27 |
| HORVU0Hr1G004850.1 | Barley | cytosol | 26.07 | 46.2 |
| TraesCS2D01G327700.1 | Wheat | golgi | 47.55 | 46.13 |
| EES07282 | Sorghum | extracellular | 51.23 | 45.63 |
| HORVU6Hr1G076470.2 | Barley | extracellular, plasma membrane | 52.45 | 44.76 |
| OQU81730 | Sorghum | extracellular, golgi | 46.63 | 44.06 |
| TraesCS6D01G289300.1 | Wheat | extracellular, plasma membrane | 53.07 | 42.2 |
| OQU75673 | Sorghum | extracellular, mitochondrion | 21.17 | 41.07 |
| AT2G18980.1 | Thale cress | extracellular | 39.88 | 40.25 |
| AT3G49960.1 | Thale cress | extracellular | 40.18 | 39.82 |
| AT4G30170.1 | Thale cress | endoplasmic reticulum, extracellular | 38.65 | 38.77 |
| AT4G37530.1 | Thale cress | extracellular | 38.96 | 38.6 |
| AT5G67400.1 | Thale cress | extracellular | 38.96 | 38.6 |
| Zm00001d003381_P001 | Maize | cytosol, mitochondrion | 47.85 | 38.14 |
| AT4G37520.1 | Thale cress | extracellular | 38.34 | 37.99 |
| Os02t0741200-01 | Rice | plasma membrane | 51.53 | 37.33 |
| AT5G14130.2 | Thale cress | extracellular | 41.72 | 36.66 |
| AT2G34060.1 | Thale cress | extracellular | 38.34 | 36.13 |
| AT2G24800.1 | Thale cress | extracellular | 36.2 | 35.87 |
| AT4G31760.1 | Thale cress | extracellular, vacuole | 35.28 | 35.28 |
Protein Annotations
| KEGG:00940+1.11.1.7 | Gene3D:1.10.420.10 | Gene3D:1.10.520.10 | MapMan:35.1 | EntrezGene:839023 | ProteinID:AAC00571.1 |
| ProteinID:AEE30479.1 | ArrayExpress:AT1G24110 | EnsemblPlantsGene:AT1G24110 | RefSeq:AT1G24110 | TAIR:AT1G24110 | RefSeq:AT1G24110-TAIR-G |
| EnsemblPlants:AT1G24110.1 | TAIR:AT1G24110.1 | EMBL:DQ056462 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004601 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0020037 | GO:GO:0042744 |
| GO:GO:0046872 | GO:GO:0055114 | GO:GO:0098869 | InterPro:Haem_peroxidase | InterPro:Haem_peroxidase_pln/fun/bac | InterPro:IPR002016 |
| RefSeq:NP_173821.1 | UniProt:O48677 | PFAM:PF00141 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0003011 |
| PO:PO:0007616 | PO:PO:0009031 | PO:PO:0009046 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00458 |
| PRINTS:PR00461 | ScanProsite:PS00435 | ScanProsite:PS00436 | PFscan:PS50873 | PANTHER:PTHR31517 | PANTHER:PTHR31517:SF31 |
| InterPro:Peroxidase_pln | InterPro:Peroxidases_AS | InterPro:Peroxidases_heam-ligand_BS | SUPFAM:SSF48113 | InterPro:Secretory_peroxidase | SignalP:SignalP-noTM |
| UniParc:UPI00000482BB | SEG:seg | : | : | : | : |
Description
PER6Peroxidase 6 [Source:UniProtKB/Swiss-Prot;Acc:O48677]
Coordinates
chr1:+:8527714..8529018
Molecular Weight (calculated)
36255.4 Da
IEP (calculated)
6.760
GRAVY (calculated)
-0.220
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSFGLCLFI LVSSPCLLQA NLSSDYYTKT CPEFEETLVQ IVTDKQIAAP TTAVGTLRLF FHDCMVDGCD ASILVASTPR KTSERDADIN RSLPGDAFDV
101: ITRIKTAVEL KCPNIVSCSD ILVGATRSLI SMVGGPRVNV KFGRKDSLVS DMNRVEGKLA RPNMTMDHII SIFESSGLTV QEMVALVGAH TIGFSHCKEF
201: ASRIFNKSDQ NGPVEMNPKY AAELRKLCAN YTNDEQMSAF NDVFTPGKFD NMYYKNLKHG YGLLQSDHAI AFDNRTRSLV DLYAEDETAF FDAFAKAMEK
301: VSEKNVKTGK LGEVRRRCDQ YNDYKG
101: ITRIKTAVEL KCPNIVSCSD ILVGATRSLI SMVGGPRVNV KFGRKDSLVS DMNRVEGKLA RPNMTMDHII SIFESSGLTV QEMVALVGAH TIGFSHCKEF
201: ASRIFNKSDQ NGPVEMNPKY AAELRKLCAN YTNDEQMSAF NDVFTPGKFD NMYYKNLKHG YGLLQSDHAI AFDNRTRSLV DLYAEDETAF FDAFAKAMEK
301: VSEKNVKTGK LGEVRRRCDQ YNDYKG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.