Factsheet for TraesCS6B01G042500.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G005540.1	Barley	extracellular	88.78	91.35
TraesCS6B01G042600.1	Wheat	extracellular	81.0	83.07
TraesCS7B01G328600.1	Wheat	extracellular	73.21	74.37
Os06t0695400-01	Rice	extracellular	68.22	68.65
EER88881	Sorghum	extracellular	65.73	66.35
Zm00001d014603_P001	Maize	extracellular	66.04	66.25
EER88880	Sorghum	extracellular	65.73	65.94
Zm00001d014606_P001	Maize	extracellular	64.49	65.3
KRH58057	Soybean	mitochondrion	50.78	50.15
KRH04463	Soybean	endoplasmic reticulum	50.16	49.54
PGSC0003DMT400064270	Potato	extracellular	50.16	48.49
Solyc02g092580.2.1	Tomato	extracellular	50.16	48.49
AT3G49960.1	Thale cress	extracellular	48.29	47.11
GSMUA_Achr10P...	Banana	extracellular	48.29	46.97
PGSC0003DMT400038514	Potato	extracellular	48.29	46.83
CDY29561	Canola	extracellular	47.04	46.32
VIT_07s0129g00360.t01	Wine grape	extracellular	47.66	46.22
TraesCS2B01G278500.1	Wheat	extracellular	46.11	45.82
KRH28377	Soybean	endoplasmic reticulum	46.73	45.73
TraesCS7B01G328400.1	Wheat	mitochondrion	48.91	45.64
Solyc03g044100.2.1	Tomato	extracellular	47.04	45.62
CDX81319	Canola	extracellular	46.73	45.59
TraesCS5B01G405400.1	Wheat	extracellular	46.11	45.54
KRH77106	Soybean	endoplasmic reticulum	46.42	45.43
Bra017830.1-P	Field mustard	cytosol	35.51	45.42
TraesCS2B01G530200.1	Wheat	extracellular	46.11	45.12
CDX72634	Canola	extracellular	45.79	45.09
Bra037849.1-P	Field mustard	extracellular	46.11	44.98
AT4G37530.1	Thale cress	extracellular	46.11	44.98
CDY18657	Canola	extracellular	46.11	44.98
CDX75661	Canola	extracellular	45.48	44.79
Bra011771.1-P	Field mustard	extracellular	45.48	44.79
AT4G37520.1	Thale cress	extracellular	45.79	44.68
CDX69313	Canola	extracellular	45.17	44.48
AT5G67400.1	Thale cress	extracellular	45.17	44.07
TraesCS5B01G287600.1	Wheat	extracellular	44.55	43.73
CDY43573	Canola	extracellular	39.56	43.2
CDY37853	Canola	mitochondrion	44.55	42.69
Bra031832.1-P	Field mustard	mitochondrion	44.55	42.69
TraesCS5B01G405300.1	Wheat	extracellular	42.06	42.19
CDX69314	Canola	extracellular	42.06	41.41
TraesCS7B01G159300.1	Wheat	extracellular, vacuole	42.06	40.54
TraesCS2B01G346800.1	Wheat	extracellular	39.56	37.91
TraesCS6B01G339700.1	Wheat	plastid	38.01	35.16
TraesCS3B01G272100.1	Wheat	extracellular, mitochondrion	37.38	33.52
TraesCS2B01G373000.1	Wheat	extracellular, plastid, vacuole	36.14	23.43

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0020037	GO:GO:0042744	GO:GO:0055114	InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435
ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31517	PANTHER:PTHR31517:SF21	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS
InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6B01G042500
EnsemblPlants:TraesCS6B01G042500.1	TIGR:cd00693	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6B:+:26076576..26078141

Molecular Weight (calculated)

35105.6 Da

IEP (calculated)

4.742

GRAVY (calculated)

-0.078

Length

321 amino acids

Sequence
(BLAST)

001: MANLESLASL AAILILVLVE VAVLSSFAAA QLRPDYYANV CPNLEGIVRY SVKQSMVKSP ISAPATLRLF FHDCAVMGCD ASVMIISPTG DDEWRNQDDY
101: SLKPEGFQTI LDAKAAVDSD LQCRYKVSCA DIIALAARES VSQSGGPNYT VELGRYDGKI STTNSVMLPH VDDNLDSLNS FFYTLGLSQI DMIALSGAHT
201: LGAADCGFFQ HRTRGKDPSM NPSFDAQLQG TCARQNFAFL DDVTPVGFDN SYFKLLQNGR GLLGSDQVLY TDQRSRGTID YYASNQGIFF YDFSIAMTKL
301: GKVGVKTATD GEIRRDCRYP N

Best Arabidopsis Sequence Match ( AT2G18980.1 )
(BLAST)

001: MKNQSSFSIV ALLLIFFSSS VFAQLQTNFY RKSCPNVETI VRNAVRQKFQ QTFVTAPATL RLFFHDCFVR GCDASILLAS PSEKDHPDDK SLAGDGFDTV
101: AKAKQALDRD PNCRNKVSCA DILALATRDV VVLTGGPNYP VELGRRDGRL STVASVQHSL PQPSFKLDQL NTMFARHGLS QTDMIALSGA HTIGFAHCGK
201: FSKRIYNFSP KRPIDPTLNI RYALQLRQMC PIRVDLRIAI NMDPTSPNTF DNAYFKNLQK GMGLFTSDQV LFSDERSRST VNSFASSEAT FRQAFISAIT
301: KLGRVGVKTG NAGEIRRDCS RVN

Arabidopsis Description

PER16Peroxidase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q96518]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.