Factsheet for PGSC0003DMT400075962

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
nucleus 1
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g069040.2.1	Tomato	nucleus	95.83	95.83
KRH04962	Soybean	extracellular	61.9	63.8
PGSC0003DMT400010469	Potato	extracellular	58.93	60.18
PGSC0003DMT400038514	Potato	extracellular	57.44	58.31
PGSC0003DMT400052215	Potato	extracellular	55.36	57.23
PGSC0003DMT400064270	Potato	extracellular	56.25	56.93
KRH16131	Soybean	endoplasmic reticulum, plasma membrane	37.2	49.6
PGSC0003DMT400001375	Potato	extracellular	40.48	41.46
PGSC0003DMT400052807	Potato	extracellular	38.99	41.07
PGSC0003DMT400040260	Potato	extracellular	39.29	39.4
PGSC0003DMT400027833	Potato	cytosol	11.61	39.39
PGSC0003DMT400027831	Potato	extracellular	29.46	39.13
PGSC0003DMT400059099	Potato	extracellular	29.46	39.13

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	EntrezGene:102594915	MapMan:35.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491
GO:GO:0020037	GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	UniProt:M1CVZ8	PFAM:PF00141	EnsemblPlantsGene:PGSC0003DMG400029546	PGSC:PGSC0003DMG400029546
EnsemblPlants:PGSC0003DMT400075962	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31517
PANTHER:PTHR31517:SF10	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM
UniParc:UPI000296F269	RefSeq:XP_015167704.1	SEG:seg	:	:	:

Description

Class III peroxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400029546]

Coordinates

chr8:+:44802946..44806488

Molecular Weight (calculated)

37121.8 Da

IEP (calculated)

9.688

GRAVY (calculated)

-0.121

Length

336 amino acids

Sequence
(BLAST)

001: MDRLISRSQF LHLILLLLLL LSIVSNKSCI NAQLHRDFYR NSCPNVESIV RSAVEQKYRQ TIVTAAATLR LFFHDCFIQG CDASIILRSS GNNTAEKDHP
101: DNISLAGDGY DAVIKAKAAV DNVPACKNKV SCADILAMAT RDVVALAGGP HYAVELGRRD GRVSSQNSVP NNLPHSEFHL KKLLPMFASR GLSIRHLIAL
201: SGAHTLGFSH CNQFSSRIYS FNSKRKVDPT IDSIYAKELQ EMCPQNASPG VVIPLDPDTP QVFDNMYFKN LQRGKGLFTS DQTLYTKRGS RNIVNLFASN
301: KTAFERVFIA AMTKLGRFGV KTGNLGEIRK DCAVVN

Best Arabidopsis Sequence Match ( AT2G18980.1 )
(BLAST)

001: MKNQSSFSIV ALLLIFFSSS VFAQLQTNFY RKSCPNVETI VRNAVRQKFQ QTFVTAPATL RLFFHDCFVR GCDASILLAS PSEKDHPDDK SLAGDGFDTV
101: AKAKQALDRD PNCRNKVSCA DILALATRDV VVLTGGPNYP VELGRRDGRL STVASVQHSL PQPSFKLDQL NTMFARHGLS QTDMIALSGA HTIGFAHCGK
201: FSKRIYNFSP KRPIDPTLNI RYALQLRQMC PIRVDLRIAI NMDPTSPNTF DNAYFKNLQK GMGLFTSDQV LFSDERSRST VNSFASSEAT FRQAFISAIT
301: KLGRVGVKTG NAGEIRRDCS RVN

Arabidopsis Description

PER16Peroxidase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q96518]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.