Factsheet for Solyc08g069040.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
nucleus 1
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400075962	Potato	extracellular, golgi	95.83	95.83
KRH04962	Soybean	extracellular	61.61	63.5
Solyc07g017880.2.1	Tomato	extracellular	59.23	60.49
Solyc02g092580.2.1	Tomato	extracellular	58.04	58.73
Solyc03g044100.2.1	Tomato	extracellular	57.74	58.61
Solyc02g094180.2.1	Tomato	endoplasmic reticulum, extracellular, golgi	55.06	56.92
KRH16131	Soybean	endoplasmic reticulum, plasma membrane	36.61	48.81
Solyc02g087190.1.1	Tomato	extracellular	41.07	42.07
Solyc08g007150.1.1	Tomato	extracellular	39.29	41.38
Solyc02g077300.1.1	Tomato	nucleus	42.26	40.92
Solyc05g006230.1.1	Tomato	extracellular	38.69	38.81
Solyc12g096530.1.1	Tomato	extracellular, golgi, mitochondrion, plasma membrane, plastid	38.1	36.89

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0006950	GO:GO:0006979
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037
GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016	UniProt:K4CMC4	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00436
PFscan:PS50873	PANTHER:PTHR31517	PANTHER:PTHR31517:SF10	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	SUPFAM:SSF48113
InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc08g069040.2	EnsemblPlants:Solyc08g069040.2.1	UniParc:UPI000276ACC6	SEG:seg

Description

Peroxidase [Source:UniProtKB/TrEMBL;Acc:K4CMC4]

Coordinates

chr8:+:58125521..58127215

Molecular Weight (calculated)

37140.7 Da

IEP (calculated)

9.260

GRAVY (calculated)

-0.165

Length

336 amino acids

Sequence
(BLAST)

001: MDRLISSSQL LHLILLLLSI MSNTSCINAQ LHRDFYRNSC PNVESIVRSA VEQKYRQTIV TAAATLRLFF HDCFIQGCDA SIILRSSGNN TAEKDHPDNI
101: SLAGDGYDTV IKAKAAVDNV PACKNKVSCA DILAMATRDV VALAGGPHYA VELGRRDGRV SSQNSVPSNL PHSEFHLKKL LPMFASRGLS IRHLIALSGA
201: HTLGFSHCNQ FSNRIYSFNS KRKVDPTINE VYAKELQEMC PQNASPGVVI PLDPDTPQVF DNMYFKNLQR GKGLFTSDQT LYTKRGSRNI VDLFASNKTA
301: FERVFIAAMT KLGRFGVKTG NLGEIRKDCA VVNRIE

Best Arabidopsis Sequence Match ( AT4G30170.1 )
(BLAST)

001: MEKNTSQTIF SNFFLLLLLS SCVSAQLRTG FYQNSCPNVE TIVRNAVRQK FQQTFVTAPA TLRLFFHDCF VRGCDASIMI ASPSERDHPD DMSLAGDGFD
101: TVVKAKQAVD SNPNCRNKVS CADILALATR EVVVLTGGPS YPVELGRRDG RISTKASVQS QLPQPEFNLN QLNGMFSRHG LSQTDMIALS GAHTIGFAHC
201: GKMSKRIYNF SPTTRIDPSI NRGYVVQLKQ MCPIGVDVRI AINMDPTSPR TFDNAYFKNL QQGKGLFTSD QILFTDQRSR STVNSFANSE GAFRQAFITA
301: ITKLGRVGVL TGNAGEIRRD CSRVN

Arabidopsis Description

PER45Peroxidase 45 [Source:UniProtKB/Swiss-Prot;Acc:Q96522]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.