Factsheet for Solyc07g017880.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 2
plastid 1
extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

nucleus: 28394025
extracellular: 29876421

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400010469	Potato	extracellular	96.35	96.35
KRH02841	Soybean	extracellular	72.95	74.07
Bra024102.1-P	Field mustard	endoplasmic reticulum, extracellular	72.34	73.23
CDX72214	Canola	endoplasmic reticulum, extracellular	72.34	73.23
AT2G18980.1	Thale cress	extracellular	71.43	72.76
CDY28166	Canola	extracellular	71.43	72.53
Bra011170.1-P	Field mustard	extracellular	71.12	72.22
KRH19050	Soybean	endoplasmic reticulum	71.12	72.22
AT4G30170.1	Thale cress	endoplasmic reticulum, extracellular	71.12	72.0
VIT_11s0052g00650.t01	Wine grape	extracellular	71.12	71.78
KRH37292	Soybean	endoplasmic reticulum	70.21	70.43
KRH12267	Soybean	extracellular	67.48	65.49
Solyc02g094180.2.1	Tomato	endoplasmic reticulum, extracellular, golgi	63.83	64.62
Solyc02g092580.2.1	Tomato	extracellular	65.05	64.46
Solyc03g044100.2.1	Tomato	extracellular	63.22	62.84
Solyc08g069040.2.1	Tomato	nucleus	60.49	59.23
CDY51649	Canola	extracellular	62.61	54.07
CDY66754	Canola	extracellular	70.21	49.04
Solyc02g087190.1.1	Tomato	extracellular	45.29	45.43
Solyc08g007150.1.1	Tomato	extracellular	40.12	41.38
Solyc02g077300.1.1	Tomato	nucleus	42.86	40.63
Solyc05g006230.1.1	Tomato	extracellular	41.34	40.6
Solyc12g096530.1.1	Tomato	extracellular, golgi, mitochondrion, plasma membrane, plastid	37.99	36.02

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0006950	GO:GO:0006979
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037
GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016	UniProt:K4CCK2	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435
ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31517	PANTHER:PTHR31517:SF10	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS
InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc07g017880.2	EnsemblPlants:Solyc07g017880.2.1
TMHMM:TMhelix	UniParc:UPI000276C1C0	:	:	:	:

Description

Peroxidase [Source:UniProtKB/TrEMBL;Acc:K4CCK2]

Coordinates

chr7:-:8260969..8263025

Molecular Weight (calculated)

36282.5 Da

IEP (calculated)

9.605

GRAVY (calculated)

-0.212

Length

329 amino acids

Sequence
(BLAST)

001: MENQKKISNL FFVMLLILSV SSIAFGQLKT DFYKNTCPNV ESLVRSAVRL KFQQTFVTAP ATLRLFFHDC FVRGCDASML LSSPNGKAEK DHPDNLSLAG
101: DGFDTVVKAK AAVDSDSKCR NKVSCADILA LATREVVAMT GGPFYPVELG RRDGKVSTLT SVQHQLPGEG FNLDQLNTMF ARRGLSQTDM IALSGAHTLG
201: FSHCNRVSKR LYNFSPKSSV DPTLNKAYVA QLKQMCPLRV DPRIAINMDP TTPNTFDNAY YKNLQQGKGL FVSDQILFTD SRSRNTVNLF ASNNDAFKQA
301: FATAMTKLGR VGVLTGNQGE IRFDCTRPN

Best Arabidopsis Sequence Match ( AT4G30170.1 )
(BLAST)

001: MEKNTSQTIF SNFFLLLLLS SCVSAQLRTG FYQNSCPNVE TIVRNAVRQK FQQTFVTAPA TLRLFFHDCF VRGCDASIMI ASPSERDHPD DMSLAGDGFD
101: TVVKAKQAVD SNPNCRNKVS CADILALATR EVVVLTGGPS YPVELGRRDG RISTKASVQS QLPQPEFNLN QLNGMFSRHG LSQTDMIALS GAHTIGFAHC
201: GKMSKRIYNF SPTTRIDPSI NRGYVVQLKQ MCPIGVDVRI AINMDPTSPR TFDNAYFKNL QQGKGLFTSD QILFTDQRSR STVNSFANSE GAFRQAFITA
301: ITKLGRVGVL TGNAGEIRRD CSRVN

Arabidopsis Description

PER45Peroxidase 45 [Source:UniProtKB/Swiss-Prot;Acc:Q96522]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.