Factsheet for Solyc02g077300.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 4
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400027833	Potato	cytosol	27.67	96.97
PGSC0003DMT400059099	Potato	extracellular	67.44	92.49
PGSC0003DMT400027831	Potato	extracellular	67.44	92.49
VIT_10s0003g00650.t01	Wine grape	extracellular	72.91	72.49
CDY64768	Canola	cytosol	8.07	68.29
KRH20350	Soybean	extracellular	67.72	67.34
AT2G34060.1	Thale cress	extracellular	60.23	60.4
CDY17218	Canola	extracellular	55.04	60.06
Bra005456.1-P	Field mustard	extracellular	54.76	59.75
Bra005458.1-P	Field mustard	extracellular	54.76	59.75
HORVU3Hr1G065950.2	Barley	mitochondrion, nucleus	33.72	59.39
GSMUA_Achr1P27370_001	Banana	extracellular, golgi	58.5	57.51
CDY64769	Canola	extracellular	39.77	53.7
TraesCS3D01G244200.1	Wheat	extracellular	52.45	50.98
TraesCS3B01G272100.1	Wheat	extracellular, mitochondrion	52.45	50.84
EES01229	Sorghum	extracellular, golgi	53.6	50.27
Zm00001d043938_P001	Maize	extracellular, golgi, mitochondrion	53.6	50.0
Solyc08g007150.1.1	Tomato	extracellular	41.79	45.45
Solyc02g087190.1.1	Tomato	extracellular	41.79	44.21
Solyc02g094180.2.1	Tomato	endoplasmic reticulum, extracellular, golgi	40.63	43.38
Solyc02g092580.2.1	Tomato	extracellular	41.21	43.07
Solyc07g017880.2.1	Tomato	extracellular	40.63	42.86
Solyc08g069040.2.1	Tomato	nucleus	40.92	42.26
Solyc03g044100.2.1	Tomato	extracellular	39.77	41.69
Solyc05g006230.1.1	Tomato	extracellular	37.75	39.1
Solyc12g096530.1.1	Tomato	extracellular, golgi, mitochondrion, plasma membrane, plastid	33.72	33.72
HORVU3Hr1G060930.1	Barley	mitochondrion	23.05	32.92

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009505
GO:GO:0009506	GO:GO:0009664	GO:GO:0009987	GO:GO:0016043	GO:GO:0016491	GO:GO:0020037
GO:GO:0030312	GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	UniProt:K4B8V7	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461
ScanProsite:PS00435	ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF56	InterPro:Peroxidase_pln
InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc02g077300.1
EnsemblPlants:Solyc02g077300.1.1	TMHMM:TMhelix	UniParc:UPI0002767B21	SEG:seg	:	:

Description

Peroxidase [Source:UniProtKB/TrEMBL;Acc:K4B8V7]

Coordinates

chr2:+:42278862..42280855

Molecular Weight (calculated)

38310.1 Da

IEP (calculated)

9.397

GRAVY (calculated)

-0.233

Length

347 amino acids

Sequence
(BLAST)

001: MSSSPTFSSF VTIFMFLFFL NLPFSNSQLP IKATIRRAPR QLSVNYYAKS CPQVESLVGS VTSNMYKEAP ASGPATIRLF FHDCFVEGCD GSILISSKAG
101: SKELAEKDAE DNKDIAKEAF EGINKAKAIV ESKCPGVVSC ADILAIATRN FVHLVGGPYY EVKKGRWDGK LSKASRVHQN LPQSNSTVDQ LLKLFSSKGL
201: TSEDLVVLSG AHTIGFAHCK QFVNRIYNYK GTKKPDPYMD PRLFKALKMS CPQYGGNVDI VAPFDVTTPF SFDNAYYGNL EAKLGLLASD QALSLDPRTK
301: PLVQELAKDK HKFFQAFADA MEKMGGIGVK RGRKHGEFRK DCTMHHV

Best Arabidopsis Sequence Match ( AT2G34060.1 )
(BLAST)

001: MHVISLSLSS IFFFLFLTST ILISPVQPTT SKPPAPRPHR ELSADYYSKK CPQLETLVGS VTSQRFKEVP ISAPATIRLF FHDCFVEGCD GSILIETKKG
101: SKKLAEREAY ENKELREEGF DSIIKAKALV ESHCPSLVSC SDILAIAARD FIHLAGGPYY QVKKGRWDGK RSTAKNVPPN IPRSNSTVDQ LIKLFASKGL
201: TVEELVVLSG SHTIGFAHCK NFLGRLYDYK GTKRPDPSLD QRLLKELRMS CPFSGGSSGV VLPLDATTPF VFDNGYFTGL GTNMGLLGSD QALFLDPRTK
301: PIALEMARDK QKFLKAFGDA MDKMGSIGVK RGKRHGEIRT DCRVFL

Arabidopsis Description

PER19Peroxidase 19 [Source:UniProtKB/Swiss-Prot;Acc:O22959]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.