Factsheet for VIT_10s0003g00650.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400027833	Potato	cytosol	23.5	82.83
Solyc02g077300.1.1	Tomato	nucleus	72.49	72.91
KRH20350	Soybean	extracellular	70.2	70.2
PGSC0003DMT400059099	Potato	extracellular	50.72	69.96
PGSC0003DMT400027831	Potato	extracellular	50.72	69.96
CDY64768	Canola	cytosol	7.45	63.41
AT2G34060.1	Thale cress	extracellular	61.03	61.56
HORVU3Hr1G065950.2	Barley	mitochondrion, nucleus	34.38	60.91
GSMUA_Achr1P27370_001	Banana	extracellular, golgi	61.6	60.91
Bra005456.1-P	Field mustard	extracellular	54.44	59.75
CDY17218	Canola	extracellular	54.44	59.75
Bra005458.1-P	Field mustard	extracellular	54.44	59.75
CDY64769	Canola	extracellular	39.26	53.31
TraesCS3D01G244200.1	Wheat	extracellular	54.15	52.94
TraesCS3B01G272100.1	Wheat	extracellular, mitochondrion	54.15	52.79
Zm00001d043938_P001	Maize	extracellular, golgi, mitochondrion	54.73	51.34
EES01229	Sorghum	extracellular, golgi	53.87	50.81
VIT_14s0068g01910.t01	Wine grape	extracellular	14.04	49.0
VIT_10s0042g00080.t01	Wine grape	extracellular	43.55	45.24
VIT_01s0026g00830.t01	Wine grape	extracellular	41.55	44.21
VIT_17s0000g07750.t01	Wine grape	extracellular	40.97	43.73
VIT_14s0068g01920.t01	Wine grape	extracellular	39.26	43.49
VIT_14s0066g01850.t01	Wine grape	extracellular	39.26	42.41
VIT_11s0052g00650.t01	Wine grape	extracellular	39.26	42.02
VIT_07s0129g00360.t01	Wine grape	extracellular	38.97	41.09
VIT_14s0068g01900.t01	Wine grape	mitochondrion	11.46	37.04
VIT_04s0008g07040.t01	Wine grape	extracellular, plasma membrane	34.67	36.78
HORVU3Hr1G060930.1	Barley	mitochondrion	22.64	32.51

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	EntrezGene:100250264	wikigene:100250264	MapMan:35.1
ProteinID:CCB55649	ProteinID:CCB55649.1	UniProt:F6HM61	EMBL:FN595992	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009505
GO:GO:0009506	GO:GO:0009664	GO:GO:0009987	GO:GO:0016043	GO:GO:0016491	GO:GO:0020037
GO:GO:0030312	GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	EntrezGene:LOC100250264	wikigene:LOC100250264	PFAM:PF00141	PRINTS:PR00458
PRINTS:PR00461	ScanProsite:PS00435	ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF56
InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-TM
TMHMM:TMhelix	UniParc:UPI00019840FA	ArrayExpress:VIT_10s0003g00650	EnsemblPlantsGene:VIT_10s0003g00650	EnsemblPlants:VIT_10s0003g00650.t01	unigene:Vvi.22384
RefSeq:XP_002272881	RefSeq:XP_002272881.1	SEG:seg	:	:	:

Description

Peroxidase [Source:UniProtKB/TrEMBL;Acc:F6HM61]

Coordinates

chr10:-:1870339..1872340

Molecular Weight (calculated)

38621.6 Da

IEP (calculated)

9.318

GRAVY (calculated)

-0.101

Length

349 amino acids

Sequence
(BLAST)

001: MFMLLSSFSS SSFLLISFFF FLLFLPTSYS LTKPTNATRR HRQLSINYYA TSCPQLEQLV ASVTAQQFKE APVSGPATIR LFFHDCFVEG CDGSILISSK
101: PGTGVLVEKD AYDNRDLAAE AFESVRKAKV LVESKCPGVV SCADILVIAA RDFVHLAGGP YYQVKKGRWD GKISKASRVN SNLPRANSTV DELIKLFKSK
201: GLTMEDLVVL SGAHTIGFAH CEHFVNRLYD YGGTKQPDSA IDPRLLKALK MSCPRFGGNA DIVAPFDVTT PFTFDNAYYG NLEAKLGLLA TDQALFLDPR
301: TKPLVQAMGK DRQKFFQEFA AAMEKMGSIG VKRGRRHGEK RKDCSMHMS

Best Arabidopsis Sequence Match ( AT2G34060.1 )
(BLAST)

001: MHVISLSLSS IFFFLFLTST ILISPVQPTT SKPPAPRPHR ELSADYYSKK CPQLETLVGS VTSQRFKEVP ISAPATIRLF FHDCFVEGCD GSILIETKKG
101: SKKLAEREAY ENKELREEGF DSIIKAKALV ESHCPSLVSC SDILAIAARD FIHLAGGPYY QVKKGRWDGK RSTAKNVPPN IPRSNSTVDQ LIKLFASKGL
201: TVEELVVLSG SHTIGFAHCK NFLGRLYDYK GTKRPDPSLD QRLLKELRMS CPFSGGSSGV VLPLDATTPF VFDNGYFTGL GTNMGLLGSD QALFLDPRTK
301: PIALEMARDK QKFLKAFGDA MDKMGSIGVK RGKRHGEIRT DCRVFL

Arabidopsis Description

PER19Peroxidase 19 [Source:UniProtKB/Swiss-Prot;Acc:O22959]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.