Factsheet for VIT_04s0008g07040.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH05338	Soybean	extracellular	71.43	71.21
KRH15691	Soybean	extracellular	69.91	69.91
KRH52303	Soybean	extracellular, vacuole	67.78	68.4
Solyc12g096530.1.1	Tomato	extracellular, golgi, mitochondrion, plasma membrane, plastid	67.17	63.69
KRH61638	Soybean	cytosol	29.79	63.64
AT4G31760.1	Thale cress	extracellular, vacuole	61.7	62.27
AT2G24800.1	Thale cress	extracellular	62.01	62.01
Bra007831.1-P	Field mustard	extracellular, vacuole	61.7	60.96
CDY34754	Canola	extracellular, vacuole	61.7	60.96
CDX76791	Canola	extracellular, vacuole	61.4	60.66
CDY71322	Canola	plastid	61.4	59.94
GSMUA_Achr4P02020_001	Banana	extracellular	59.57	59.21
HORVU2Hr1G086160.3	Barley	cytosol	42.86	54.23
GSMUA_Achr3P04780_001	Banana	extracellular	58.36	53.33
VIT_14s0068g01910.t01	Wine grape	extracellular	14.59	48.0
OQU81880	Sorghum	plastid	50.15	43.88
VIT_14s0068g01920.t01	Wine grape	extracellular	41.95	43.81
VIT_17s0000g07750.t01	Wine grape	extracellular	41.64	41.9
VIT_14s0068g01900.t01	Wine grape	mitochondrion	13.68	41.67
VIT_14s0066g01850.t01	Wine grape	extracellular	39.21	39.94
VIT_10s0042g00080.t01	Wine grape	extracellular	40.73	39.88
VIT_11s0052g00650.t01	Wine grape	extracellular	38.6	38.96
VIT_01s0026g00830.t01	Wine grape	extracellular	37.99	38.11
VIT_07s0129g00360.t01	Wine grape	extracellular	37.99	37.76
TraesCS2D01G353000.1	Wheat	extracellular	51.98	35.55
TraesCS2A01G355300.1	Wheat	extracellular, plasma membrane, plastid	51.98	35.04
TraesCS2B01G373000.1	Wheat	extracellular, plastid, vacuole	52.28	34.75
Zm00001d025774_P003	Maize	extracellular	51.06	34.71
VIT_10s0003g00650.t01	Wine grape	extracellular	36.78	34.67
HORVU2Hr1G086120.3	Barley	mitochondrion	51.67	34.0
Os04t0498700-01	Rice	extracellular, golgi, mitochondrion, vacuole	49.54	32.09

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	EntrezGene:100249258	wikigene:100249258	MapMan:35.1
ProteinID:CCB46888	ProteinID:CCB46888.1	UniProt:F6H3K2	EMBL:FN595231	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009505
GO:GO:0009506	GO:GO:0009664	GO:GO:0009987	GO:GO:0016043	GO:GO:0016491	GO:GO:0020037
GO:GO:0030312	GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	EntrezGene:LOC100249258	wikigene:LOC100249258	PFAM:PF00141	PRINTS:PR00458
PRINTS:PR00461	ScanProsite:PS00435	PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF9	InterPro:Peroxidase_pln
InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00015C8E74
ArrayExpress:VIT_04s0008g07040	EnsemblPlantsGene:VIT_04s0008g07040	EnsemblPlants:VIT_04s0008g07040.t01	unigene:Vvi.17488	RefSeq:XP_002285587	RefSeq:XP_002285587.1
RefSeq:XP_002285590	RefSeq:XP_002285590.1	SEG:seg	:	:	:

Description

Peroxidase [Source:UniProtKB/TrEMBL;Acc:F6H3K2]

Coordinates

chr4:+:7134486..7136999

Molecular Weight (calculated)

35847.7 Da

IEP (calculated)

5.755

GRAVY (calculated)

-0.023

Length

329 amino acids

Sequence
(BLAST)

001: METKLLVFSP QLLILLLFSF AAFPSPSSSR LAFNFYGASC PSAEFIVKNT VRSASSFDPT IPGKLLRLLF HDCMVEGCDA SVLLQGNDTE RSDPANASLG
101: GFSVINSAKR VLEIFCPGTV SCADILALAA RDAVEIVGGP MLQIPTGRRD GRASVASVVR FNIIDTSFSM DEMMKLFSSK GLSLDDLVIL SGAHTIGSAH
201: CSAFSDRFQA DSKGTLTRID TSLDKAYANE LRKKCPSSVS SSVTVNNDPE TSFLFDNQYY RNLMAHKGLF QSDSVLFSDK RTKKMVEDLA NNQNSFFERW
301: GQSFLKLTII GVKSDDEGEI RQSCEVANG

Best Arabidopsis Sequence Match ( AT4G31760.1 )
(BLAST)

001: MASSYRINCS TLLHLLMFLS SLLTSSANLS FNFYASSCSV AEFLVRNTVR SATSSDPTIP GKLLRLFFHD CFVQGCDASV LIQGNSTEKS DPGNASLGGF
101: SVIDTAKNAI ENLCPATVSC ADIVALAARD AVEAAGGPVV EIPTGRRDGK ESMAANVRPN IIDTDFTLDQ MIDAFSSKGL SIQDLVVLSG AHTIGASHCN
201: AFNGRFQRDS KGNFEVIDAS LDNSYAETLM NKCSSSESSS LTVSNDPETS AVFDNQYYRN LETHKGLFQT DSALMEDNRT RTMVEELASD EESFFQRWSE
301: SFVKLSMVGV RVGEDGEIRR SCSSVN

Arabidopsis Description

PER46Peroxidase 46 [Source:UniProtKB/Swiss-Prot;Acc:O81772]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.