CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 2
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

endoplasmic reticulum: 23041469
endoplasmic reticulum: 27224218

msms PMID: 23041469 doi

S Komatsu, R Kuji, Y Nanjo, S Hiraga, K Furukawa

National Institute of Crop Science, Tsukuba 305-8518, Japan. skomatsu@affrc.go.jp

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02841	Soybean	extracellular	93.52	93.52
KRH37292	Soybean	endoplasmic reticulum	81.48	80.49
Bra024102.1-P	Field mustard	endoplasmic reticulum, extracellular	75.62	75.38
CDX72214	Canola	endoplasmic reticulum, extracellular	75.31	75.08
KRH12267	Soybean	extracellular	77.78	74.34
CDY28166	Canola	extracellular	73.77	73.77
Bra011170.1-P	Field mustard	extracellular	73.46	73.46
VIT_11s0052g00650.t01	Wine grape	extracellular	73.77	73.31
AT2G18980.1	Thale cress	extracellular	72.22	72.45
PGSC0003DMT400010469	Potato	extracellular	72.53	71.43
Solyc07g017880.2.1	Tomato	extracellular	72.22	71.12
AT4G30170.1	Thale cress	endoplasmic reticulum, extracellular	70.37	70.15
KRH77106	Soybean	endoplasmic reticulum	67.59	66.77
KRH28377	Soybean	endoplasmic reticulum	67.28	66.46
KRH04962	Soybean	extracellular	66.67	66.26
KRH04463	Soybean	endoplasmic reticulum	66.05	65.85
KRH58057	Soybean	mitochondrion	65.43	65.23
KRH06936	Soybean	extracellular	57.41	57.06
CDY51649	Canola	extracellular	66.36	56.43
KRG94535	Soybean	extracellular	55.86	55.35
KRH16131	Soybean	endoplasmic reticulum, plasma membrane	41.67	53.57
CDY66754	Canola	extracellular	72.84	50.11
KRG92108	Soybean	extracellular	42.59	42.33
KRH34676	Soybean	extracellular	42.9	42.12
KRH20350	Soybean	extracellular	45.06	41.83
KRH18583	Soybean	endoplasmic reticulum	40.43	41.32
KRH45758	Soybean	extracellular	41.05	41.18
KRG93402	Soybean	extracellular	40.43	40.56
KRH52303	Soybean	extracellular, vacuole	40.12	39.88
KRG99232	Soybean	cytosol, mitochondrion, plastid	34.88	39.79
KRH15691	Soybean	extracellular	39.51	38.91
KRH05338	Soybean	extracellular	39.51	38.79
KRH12713	Soybean	extracellular, vacuole	24.38	38.73
KRH61638	Soybean	cytosol	17.59	37.01
KRH50144	Soybean	cytosol	14.2	33.58

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	EMBL:ACUP02008164	EnsemblPlantsGene:GLYMA_13G098400
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576
GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016491	GO:GO:0020037	GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869
InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac	UniProt:I1LVP1	InterPro:IPR002016	EnsemblPlants:KRH19050	ProteinID:KRH19050
ProteinID:KRH19050.1	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	ScanProsite:PS00436
PFscan:PS50873	PANTHER:PTHR31517	PANTHER:PTHR31517:SF10	MetaCyc:PWY-5461	MetaCyc:PWY-5466	MetaCyc:PWY-5469
MetaCyc:PWY-6824	MetaCyc:PWY-7214	MetaCyc:PWY-7445	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS
SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	UniParc:UPI00023D0B36	SEG:seg	:

Description

hypothetical protein

Coordinates

chr13:-:21354710..21356912

Molecular Weight (calculated)

36214.4 Da

IEP (calculated)

9.014

GRAVY (calculated)

-0.214

Length

324 amino acids

Sequence
(BLAST)

001: MELLNLSSCL CFFSLLVLPI SSAQLSRVFY RNTCPNVEQL VRSSVAQKFQ QTFVTAPATL RLFFHDCFVR GCDASILLAN GKPEKDHPDQ ISLAGDGFDT
101: VIKAKEAVDR DPKCRNKVSC ADILALATRD VVNLAGGPFY NVELGRRDGR ISTIASVQRH LPHPDFNLDQ LNSMFNFNGL SQTDMIALSG AHTIGFSHCN
201: KFSNRIYKFS PRNRIDPTLN LQYAFQLRQM CPLRVDPRIA INMDPVTPQK FDNQYFKNLQ QGKGLFTSDQ VLFTDARSKA TVNLFASNEG AFQKAFVDAI
301: TKLGRVGVKT GNQGEIRFDC TRPN

Best Arabidopsis Sequence Match ( AT2G18980.1 )
(BLAST)

001: MKNQSSFSIV ALLLIFFSSS VFAQLQTNFY RKSCPNVETI VRNAVRQKFQ QTFVTAPATL RLFFHDCFVR GCDASILLAS PSEKDHPDDK SLAGDGFDTV
101: AKAKQALDRD PNCRNKVSCA DILALATRDV VVLTGGPNYP VELGRRDGRL STVASVQHSL PQPSFKLDQL NTMFARHGLS QTDMIALSGA HTIGFAHCGK
201: FSKRIYNFSP KRPIDPTLNI RYALQLRQMC PIRVDLRIAI NMDPTSPNTF DNAYFKNLQK GMGLFTSDQV LFSDERSRST VNSFASSEAT FRQAFISAIT
301: KLGRVGVKTG NAGEIRRDCS RVN

Arabidopsis Description

PER16Peroxidase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q96518]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.