Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH44935 | Soybean | cytosol | 39.68 | 71.01 |
| CDX97762 | Canola | cytosol | 70.65 | 70.65 |
| CDX74460 | Canola | cytosol | 70.24 | 70.24 |
| Bra028245.1-P | Field mustard | cytosol | 70.24 | 70.24 |
| AT3G29160.1 | Thale cress | cytosol | 70.04 | 67.58 |
| TraesCS3D01G492100.1 | Wheat | cytosol | 41.3 | 67.55 |
| TraesCS3B01G545400.1 | Wheat | cytosol | 40.69 | 66.56 |
| TraesCS4A01G108700.1 | Wheat | cytosol | 45.34 | 64.0 |
| AT3G01090.2 | Thale cress | cytosol | 66.4 | 61.31 |
| Os08t0484600-01 | Rice | cytosol | 61.13 | 59.33 |
| Zm00001d028733_P003 | Maize | cytosol | 60.32 | 58.55 |
| KXG39612 | Sorghum | cytosol | 60.53 | 58.28 |
| TraesCS4A01G108800.1 | Wheat | cytosol | 59.72 | 57.96 |
| TraesCS4D01G196100.1 | Wheat | cytosol | 59.72 | 57.96 |
| TraesCS4B01G195900.1 | Wheat | cytosol | 59.72 | 57.5 |
| TraesCS3B01G545300.2 | Wheat | cytosol | 51.01 | 57.4 |
| HORVU4Hr1G056610.3 | Barley | cytosol | 59.72 | 57.39 |
| TraesCS3B01G544400.2 | Wheat | cytosol | 50.61 | 56.56 |
| TraesCS3B01G544700.1 | Wheat | cytosol | 58.1 | 56.05 |
| TraesCS3B01G544300.1 | Wheat | endoplasmic reticulum, vacuole | 52.83 | 56.01 |
| Os03t0289100-02 | Rice | plasma membrane | 60.93 | 54.93 |
| HORVU3Hr1G107970.1 | Barley | cytosol | 57.29 | 51.64 |
| HORVU3Hr1G107990.1 | Barley | cytosol | 56.68 | 50.72 |
| HORVU3Hr1G108000.3 | Barley | cytosol | 35.02 | 50.0 |
| TraesCS3D01G491900.2 | Wheat | plasma membrane | 57.49 | 48.3 |
| VIT_08s0040g00720.t01 | Wine grape | cytosol | 50.2 | 45.34 |
| TraesCS3D01G491800.1 | Wheat | mitochondrion | 24.29 | 38.22 |
| AT5G57630.1 | Thale cress | cytosol | 28.54 | 33.89 |
| AT1G48260.1 | Thale cress | cytosol | 29.15 | 33.33 |
| AT5G21326.1 | Thale cress | cytosol | 29.55 | 33.26 |
| AT3G17510.1 | Thale cress | cytosol | 29.76 | 33.11 |
| AT4G24400.1 | Thale cress | cytosol | 29.55 | 32.81 |
| AT1G01140.3 | Thale cress | cytosol | 29.55 | 32.37 |
| AT2G26980.4 | Thale cress | cytosol | 29.35 | 32.15 |
| AT5G35410.1 | Thale cress | cytosol | 28.95 | 32.06 |
| AT1G30270.1 | Thale cress | cytosol, plastid | 29.55 | 30.29 |
Protein Annotations
| KEGG:04150+2.7.11.1 | KEGG:04151+2.7.11.1 | KEGG:04714+2.7.11.1 | KEGG:04926+2.7.11.1 | KEGG:05165+2.7.11.1 | Gene3D:1.10.510.10 |
| MapMan:18.4.5.1.1 | MapMan:27.3.1.1 | Gene3D:3.30.310.80 | EntrezGene:833940 | ProteinID:AED94433.1 | ArrayExpress:AT5G39440 |
| EnsemblPlantsGene:AT5G39440 | RefSeq:AT5G39440 | TAIR:AT5G39440 | RefSeq:AT5G39440-TAIR-G | EnsemblPlants:AT5G39440.1 | TAIR:AT5G39440.1 |
| Unigene:At.55254 | ProteinID:BAB11017.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 |
| GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008219 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 |
| GO:GO:0016740 | GO:GO:0019538 | GO:GO:0035556 | GO:GO:0043066 | InterPro:IPR000719 | InterPro:IPR001772 |
| InterPro:IPR015940 | InterPro:KA1/Ssp2_C | InterPro:KA1_dom | InterPro:Kinase-like_dom_sf | RefSeq:NP_198760.1 | PFAM:PF00069 |
| PFAM:PF00627 | PFAM:PF02149 | PO:PO:0000005 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 |
| PFscan:PS50030 | PFscan:PS50032 | PANTHER:PTHR24343 | PANTHER:PTHR24343:SF156 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS |
| UniProt:Q9FLZ3 | SMART:SM00165 | SMART:SM00220 | SUPFAM:SSF103243 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| Symbol:SnRK1.3 | InterPro:UBA | UniParc:UPI00000AA2F4 | SEG:seg | : | : |
Description
SnRK1.3Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:Q9FLZ3]
Coordinates
chr5:+:15781907..15784699
Molecular Weight (calculated)
56699.0 Da
IEP (calculated)
8.003
GRAVY (calculated)
-0.146
Length
494 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGSSEKTTN KLVSILPNYR IGKTLGHGSF AKVKLALHVA TGHKVAIKIL NRSKIKNMGI EIKVQREIKI LRFLMHPHII RQYEVIETPN DIYVVMEYVK
101: SGELFDYIVE KGKLQEDEAR HLFQQIISGV EYCHRNMIVH RDLKPENVLL DSQCNIKIVD FGLSNVMHDG HFLKTSCGSP NYAAPEVISG KPYGPDVDIW
201: SCGVILYALL CGTLPFDDEN IPNVFEKIKR GMYTLPNHLS HFARDLIPRM LMVDPTMRIS ITEIRQHPWF NNHLPLYLSI PPLDTIDQAK KIEEEIIQNV
301: VNIGFDRNHV VDSLANRIQN EATVAYHLIL DNRNQNSVPN DPFQSKFKEI SDGIFNSTLP VQNITSHVGH SFSALYGLKS NVKDDKTWTL GLQSQGSPYD
401: IMTEIFKALQ NLKICWKKIG LYNIKCRWVR SFAYYKNHTI EDECAIILPT VIKFEIQLYK VREGKYLLDI LRIDGPQFIF FDLCVAFLRE LGVL
101: SGELFDYIVE KGKLQEDEAR HLFQQIISGV EYCHRNMIVH RDLKPENVLL DSQCNIKIVD FGLSNVMHDG HFLKTSCGSP NYAAPEVISG KPYGPDVDIW
201: SCGVILYALL CGTLPFDDEN IPNVFEKIKR GMYTLPNHLS HFARDLIPRM LMVDPTMRIS ITEIRQHPWF NNHLPLYLSI PPLDTIDQAK KIEEEIIQNV
301: VNIGFDRNHV VDSLANRIQN EATVAYHLIL DNRNQNSVPN DPFQSKFKEI SDGIFNSTLP VQNITSHVGH SFSALYGLKS NVKDDKTWTL GLQSQGSPYD
401: IMTEIFKALQ NLKICWKKIG LYNIKCRWVR SFAYYKNHTI EDECAIILPT VIKFEIQLYK VREGKYLLDI LRIDGPQFIF FDLCVAFLRE LGVL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.