Factsheet for TraesCS3D01G439400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G245500.1
TraesCS4B01G069900.1
TraesCS4D01G068700.1
TraesCS5A01G060600.1
TraesCS5B01G071500.1
TraesCS5D01G072100.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23000.1	TraesCS4A01G245500.1	AT5G55990.1	11230129
AT3G23000.1	TraesCS4B01G069900.1	AT5G55990.1	11230129
AT3G23000.1	TraesCS4D01G068700.1	AT5G55990.1	11230129
AT3G23000.1	TraesCS5A01G060600.1	AT5G55990.1	11230129
AT3G23000.1	TraesCS5B01G071500.1	AT5G55990.1	11230129
AT3G23000.1	TraesCS5D01G072100.1	AT5G55990.1	11230129
AT3G23000.1	TraesCS4A01G245500.1	AT5G55990.1	14730130
AT3G23000.1	TraesCS4B01G069900.1	AT5G55990.1	14730130
AT3G23000.1	TraesCS4D01G068700.1	AT5G55990.1	14730130
AT3G23000.1	TraesCS5A01G060600.1	AT5G55990.1	14730130
AT3G23000.1	TraesCS5B01G071500.1	AT5G55990.1	14730130
AT3G23000.1	TraesCS5D01G072100.1	AT5G55990.1	14730130
AT4G14580.1	TraesCS4A01G245500.1	AT5G55990.1	11230129
AT4G14580.1	TraesCS4B01G069900.1	AT5G55990.1	11230129
AT4G14580.1	TraesCS4D01G068700.1	AT5G55990.1	11230129
AT4G14580.1	TraesCS5A01G060600.1	AT5G55990.1	11230129
AT4G14580.1	TraesCS5B01G071500.1	AT5G55990.1	11230129
AT4G14580.1	TraesCS5D01G072100.1	AT5G55990.1	11230129

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G446800.1	Wheat	mitochondrion	97.92	97.92
TraesCS3B01G482200.1	Wheat	mitochondrion	97.69	97.69
TraesCS5D01G068700.1	Wheat	cytosol	83.1	82.91
EES17341	Sorghum	cytosol	70.37	69.89
Zm00001d041422_P001	Maize	cytosol	63.43	66.99
TraesCS5D01G387900.1	Wheat	mitochondrion	64.81	64.97
Bra036870.1-P	Field mustard	cytosol	32.41	51.09
GSMUA_Achr6P23040_001	Banana	mitochondrion	41.67	49.32
VIT_05s0020g04570.t01	Wine grape	mitochondrion, nucleus	46.76	48.1
CDY10690	Canola	cytosol	45.83	46.7
Bra033893.1-P	Field mustard	cytosol	45.6	46.68
CDY40835	Canola	cytosol	44.44	46.38
CDY10342	Canola	cytosol, nucleus, plastid	45.37	46.12
AT4G14580.1	Thale cress	cytosol	45.14	45.77
Bra023777.1-P	Field mustard	cytosol	43.75	45.65
CDY35487	Canola	cytosol	43.52	45.41
CDY29745	Canola	cytosol, nucleus, plastid	45.37	45.37
AT3G23000.1	Thale cress	plastid	44.91	45.22
Solyc09g083090.2.1	Tomato	cytosol	40.05	44.59
KRH31632	Soybean	plastid	44.44	44.55
Solyc09g083100.1.1	Tomato	cytosol	44.68	44.47
PGSC0003DMT400015582	Potato	cytosol, peroxisome	44.91	44.29
KRG92436	Soybean	plastid	44.21	43.81
KRH34366	Soybean	cytosol, mitochondrion, nucleus, plastid	43.98	43.48
CDY29744	Canola	plastid	44.44	42.57
Solyc03g005330.1.1	Tomato	cytosol	40.97	41.36
CDY16275	Canola	plastid	45.14	41.23
PGSC0003DMT400034837	Potato	cytosol	40.74	40.65
GSMUA_Achr2P17540_001	Banana	cytosol, plasma membrane, plastid	45.6	40.62
Os12t0603700-00	Rice	cytosol	40.51	39.86
CDY16278	Canola	plastid	43.75	39.05
Bra036868.1-P	Field mustard	plastid	44.21	38.98
TraesCS2D01G537400.1	Wheat	cytosol	31.48	31.48
TraesCS2D01G537600.1	Wheat	cytosol	31.48	31.41
TraesCS2D01G107100.1	Wheat	cytosol, plastid	31.02	30.73

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
Gene3D:3.30.310.80	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR018451	InterPro:Kinase-like_dom_sf	InterPro:NAF/FISL_domain	InterPro:NAF_dom	PFAM:PF00069
PFAM:PF03822	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50816
PANTHER:PTHR24343	PANTHER:PTHR24343:SF159	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS3D01G439400	EnsemblPlants:TraesCS3D01G439400.1	TIGR:cd12195	SEG:seg	:

Description

No Description!

Coordinates

chr3D:+:549705015..549706313

Molecular Weight (calculated)

47650.7 Da

IEP (calculated)

8.485

GRAVY (calculated)

-0.177

Length

432 amino acids

Sequence
(BLAST)

001: MNGTSKKSRG TPLLGKYELG RLLGRGTFAK VYLAHTVTGG EPVAVKVIDK AEVMGTEGMA PRVLQEVEAM RRLRHPGVLR LHEVLATRAS IYLVMELAPR
101: GDLQSRLAAL PSHRFSEKAA RRVFVQLTVA LAHCHARGVT HRDLKPQNLL LDGAGNLKVS DFGLSALPDS FREDGRLHTA CGTAAYAAPE VLCNKAYDGA
201: KADAWSCGVT LFVLVAGRLP FDDANIPDMC RKACRRQYVV PPWVSPPTSR LLHRLLDPNP ETRVAVEALA GTHPWFVKRS LSLDSHLDGL LDSQPERALA
301: FRAPSVNAFD IISTSQWLDL SGMFGESRRS KEKRFVTTAS PEQTLEQLGR AGRKLGYVVV VGKKGRECQR CPLGGLTISV EISELEPPLM LVEMRLEMDD
401: GEVRVFSWDQ LRIELGDDVV RAWDSCEDLQ QV

Best Arabidopsis Sequence Match ( AT1G30270.1 )
(BLAST)

001: MASRTTPSRS TPSRSTPSGS SSGGRTRVGK YELGRTLGEG TFAKVKFARN VENGDNVAIK VIDKEKVLKN KMIAQIKREI STMKLIKHPN VIRMFEVMAS
101: KTKIYFVLEF VTGGELFDKI SSNGRLKEDE ARKYFQQLIN AVDYCHSRGV YHRDLKPENL LLDANGALKV SDFGLSALPQ QVREDGLLHT TCGTPNYVAP
201: EVINNKGYDG AKADLWSCGV ILFVLMAGYL PFEDSNLTSL YKKIFKAEFT CPPWFSASAK KLIKRILDPN PATRITFAEV IENEWFKKGY KAPKFENADV
301: SLDDVDAIFD DSGESKNLVV ERREEGLKTP VTMNAFELIS TSQGLNLGSL FEKQMGLVKR KTRFTSKSSA NEIVTKIEAA AAPMGFDVKT NNYKMKLTGE
401: KSGRKGQLAV ATEVFQVAPS LYMVEMRKSG GDTLEFHKFY KNLTTGLKDI VWKTIDEEKE EGTDGGGTNG AMANRTIAKQ ST

Arabidopsis Description

CIPK23CBL-interacting serine/threonine-protein kinase 23 [Source:UniProtKB/Swiss-Prot;Acc:Q93VD3]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.