Factsheet for VIT_05s0020g04570.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

plastid 1
cytosol 1
nucleus 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_00s0194g00040.t01
VIT_02s0025g01630.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23000.1	VIT_02s0025g01630.t01	AT4G01420.1	11230129
AT3G23000.1	VIT_00s0194g00040.t01	AT5G55990.1	11230129
AT3G23000.1	VIT_00s0194g00040.t01	AT5G55990.1	14730130
AT4G14580.1	VIT_00s0194g00040.t01	AT5G55990.1	11230129

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036870.1-P	Field mustard	cytosol	41.19	63.14
Bra023777.1-P	Field mustard	cytosol	58.1	58.94
CDY35487	Canola	cytosol	57.62	58.45
PGSC0003DMT400015582	Potato	cytosol, peroxisome	60.48	57.99
AT4G14580.1	Thale cress	cytosol	58.81	57.98
CDY10690	Canola	cytosol	58.33	57.78
Bra033893.1-P	Field mustard	cytosol	57.86	57.58
AT3G23000.1	Thale cress	plastid	58.81	57.58
KRH31632	Soybean	plastid	59.05	57.54
Solyc09g083090.2.1	Tomato	cytosol	53.1	57.47
KRH34366	Soybean	cytosol, mitochondrion, nucleus, plastid	59.76	57.44
KRG92436	Soybean	plastid	59.52	57.34
CDY40835	Canola	cytosol	55.71	56.52
CDY10342	Canola	cytosol, nucleus, plastid	57.14	56.47
Solyc09g083100.1.1	Tomato	cytosol	58.33	56.45
CDY29745	Canola	cytosol, nucleus, plastid	57.62	56.02
PGSC0003DMT400034837	Potato	cytosol	55.24	53.58
Solyc03g005330.1.1	Tomato	cytosol	54.52	53.5
Zm00001d041422_P001	Maize	cytosol	50.71	52.08
EES17341	Sorghum	cytosol	53.81	51.95
CDY29744	Canola	plastid	55.0	51.22
CDY16275	Canola	plastid	57.38	50.95
HORVU5Hr1G093660.1	Barley	cytosol, mitochondrion, plastid	51.67	50.35
Os03t0634400-01	Rice	cytosol, mitochondrion	53.57	50.34
GSMUA_Achr6P23040_001	Banana	mitochondrion	43.33	49.86
KXG37976	Sorghum	cytosol, mitochondrion, plastid	50.95	49.65
TraesCS5B01G381500.1	Wheat	mitochondrion	50.95	49.65
Zm00001d033316_P001	Maize	cytosol	50.71	49.65
TraesCS5D01G387900.1	Wheat	mitochondrion	50.48	49.19
TraesCS5A01G377900.1	Wheat	mitochondrion	50.48	49.19
TraesCS5A01G057400.1	Wheat	cytosol	50.48	48.96
TraesCS5B01G059300.1	Wheat	mitochondrion	50.24	48.84
TraesCS5D01G068700.1	Wheat	cytosol	50.0	48.5
HORVU5Hr1G014200.1	Barley	cytosol	49.76	48.27
CDY16278	Canola	plastid	55.48	48.14
Bra036868.1-P	Field mustard	plastid	55.0	47.14
TraesCS3D01G439400.1	Wheat	mitochondrion	48.1	46.76
TraesCS3A01G446800.1	Wheat	mitochondrion	48.1	46.76
TraesCS3B01G482200.1	Wheat	mitochondrion	47.62	46.3
GSMUA_Achr2P17540_001	Banana	cytosol, plasma membrane, plastid	52.62	45.57
Os12t0603700-00	Rice	cytosol	30.48	29.16

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
EntrezGene:100247675	wikigene:100247675	MapMan:18.4.5.3	Gene3D:3.30.200.20	Gene3D:3.30.310.80	ProteinID:ACQ83536
ProteinID:ACQ83536.1	EMBL:AM442501	UniProt:C4P7W9	ProteinID:CAN71886	ProteinID:CAN71886.1	ProteinID:CCB50489
ProteinID:CCB50489.1	EntrezGene:CIPK20	wikigene:CIPK20	EMBL:FJ901248	EMBL:FN595749	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719
InterPro:IPR018451	InterPro:Kinase-like_dom_sf	InterPro:NAF/FISL_domain	InterPro:NAF_dom	RefSeq:NP_001268041.1	PFAM:PF00069
PFAM:PF03822	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50816
PANTHER:PTHR24343	PANTHER:PTHR24343:SF102	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	TIGR:TC58272	TIGR:TC61006	UniParc:UPI00015C7CC9	ArrayExpress:VIT_05s0020g04570	EnsemblPlantsGene:VIT_05s0020g04570
EnsemblPlants:VIT_05s0020g04570.t01	unigene:Vvi.3091	SEG:seg	:	:	:

Description

Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:C4P7W9]

Coordinates

chr5:+:6388841..6390574

Molecular Weight (calculated)

46514.5 Da

IEP (calculated)

9.187

GRAVY (calculated)

-0.117

Length

420 amino acids

Sequence
(BLAST)

001: MEPTPAGVIL GKYKLGRLLG RGSFAKVYQA HSITDGTAVA VKIMDKARSV EAGMESRIVR EVTAMRSLQH PNILKIYEIM ATKSKIYLII ELAKGGELFT
101: KISRRGRLTE AAARRYFQQL VSALLFCHQN GVAHRDMKPQ NLLLDQDGNL KVSDFGLSAL PDQLKNGLLH TACGTPAYTA PEVVSRKGYD GAKADAWSCG
201: VILFVFLSGF LPFDDSNLVT MYRKIHRRDY QFPSWISRPA RSVISQLLDP NPNKRMSIEA LMESAWFKKS TPAKKLEHAS SFDSDMESMK VCEYGSAPLT
301: MNAFDIISMS SGLDLSGLFF EAAANKREKR FMSRASAEIT VEKMREVGEK LGYGVERGKV GSIRREAGRV VLLVEVSEVA PSLLLVEVQV VDGGEFEELK
401: WEIVKAGLED IVVSWEGSGM

Best Arabidopsis Sequence Match ( AT3G23000.1 )
(BLAST)

001: MESLPQPQNQ SSPATTPAKI LLGKYELGRR LGSGSFAKVH LARSIESDEL VAVKIIEKKK TIESGMEPRI IREIDAMRRL RHHPNILKIH EVMATKSKIY
101: LVMELASGGE LFSKVLRRGR LPESTARRYF QQLASALRFS HQDGVAHRDV KPQNLLLDEQ GNLKVSDFGL SALPEHLQNG LLHTACGTPA YTAPEVISRR
201: GYDGAKADAW SCGVILFVLL VGDVPFDDSN IAAMYRKIHR RDYRFPSWIS KQAKSIIYQM LDPNPVTRMS IETVMKTNWF KKSLETSEFH RNVFDSEVEM
301: KSSVNSITAF DLISLSSGLD LSGLFEAKKK KERRFTAKVS GVEVEEKAKM IGEKLGYVVK KKMMKKEGEV KVVGLGRGRT VIVVEAVELT VDVVVVEVKV
401: VEGEEDDSRW SDLITELEDI VLSWHNDIM

Arabidopsis Description

CIPK7CBL-interacting serine/threonine-protein kinase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIW0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.