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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • plastid 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G537400.1 Wheat cytosol 70.23 71.53
TraesCS2A01G536100.1 Wheat cytosol 69.77 71.06
TraesCS2D01G537600.1 Wheat cytosol 69.09 70.21
TraesCS2B01G566800.1 Wheat cytosol 65.68 66.74
TraesCS2B01G567900.1 Wheat cytosol 47.27 65.62
HORVU2Hr1G117610.1 Barley cytosol, nucleus 66.82 64.19
Os05t0334750-00 Rice nucleus 62.95 61.42
Os05t0333100-00 Rice cytosol, nucleus, plastid 40.23 54.13
KRH08281 Soybean cytosol 18.64 38.86
GSMUA_Achr5P29610_001 Banana cytosol, plastid 35.91 36.41
GSMUA_Achr4P15200_001 Banana cytosol 27.73 36.09
KXG37976 Sorghum cytosol, mitochondrion, plastid 32.73 33.41
EES17341 Sorghum cytosol 32.27 32.64
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
Gene3D:3.30.310.80MapMan:50.2.7EntrezGene:8061296UniProt:C4P7U3InterPro:Ca/CaM-dep_Ca-dep_prot_KinaseEnsemblPlants:EES18004
ProteinID:EES18004ProteinID:EES18004.1EMBL:FJ901222GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0018105
GO:GO:0018107GO:GO:0019538GO:GO:0035556InterPro:IPR000719InterPro:IPR018451ProteinID:KXG21703.1
InterPro:Kinase-like_dom_sfInterPro:NAF/FISL_domainInterPro:NAF_domPFAM:PF00069PFAM:PF03822PIRSF:PIRSF000654
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50816PANTHER:PTHR43895PANTHER:PTHR43895:SF13
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220EnsemblPlantsGene:SORBI_3009G097300SUPFAM:SSF56112unigene:Sbi.21623
InterPro:Ser/Thr_kinase_ASUniParc:UPI0001A4202FRefSeq:XP_002439574.1SEG:seg::
Description
hypothetical protein
Coordinates
chr9:+:35070314..35074455
Molecular Weight (calculated)
48445.3 Da
IEP (calculated)
7.575
GRAVY (calculated)
-0.194
Length
440 amino acids
Sequence
(BLAST)
001: MPPEPDDSSA AFSTGASGSY VKVLQGRYEL GRVLGRGASS KVYRARDVRS GVYVAVKAVR KPHHPCSPED AAAARRSVER ELAALRRVQG HPHVVRLLDV
101: LASRSTVYLV LDLARGGSVQ SALEERGRSE EPAARQLFGQ LVSALAHAHA RGVFHRDVKP ENLLLDERGG LKLTDFGLCA FADRQLGADG LTATACGSPA
201: YVAPEILLKK RYDPGMADVW SCGVVLFSLT AGYLPFNDGN LMGMYRKICS GKFQCPKWLS SELRSLIGRM LDPEPERRIK VGEILSHPWL QRDGMSIPVV
301: ASSPHPTPEV LKWEAESELP REMNAFDILT FASGCDLSGL IGTLPDRDRF VVSSLSINAR SILDKVEELG REEGLFRMRR KEEAGFGGIL LETIDGKFVA
401: QASVHLLHEE MLLVEVERAS NEELPKFWEK LQSSLKFLTN
Best Arabidopsis Sequence Match ( AT1G29230.1 )
(BLAST)
001: MAQALAQPPL VVTTVVPDPP PPPPPPHPKP YALRYMADLL GRIGIMDTDK DGNISPQSPR SPRSPRNNIL MGKYELGKLL GHGTFAKVYL AQNIKSGDKV
101: AIKVIDKEKI MKSGLVAHIK REISILRRVR HPYIVHLFEV MATKSKIYFV MEYVGGGELF NTVAKGRLPE ETARRYFQQL ISSVSFCHGR GVYHRDLKPE
201: NLLLDNKGNL KVSDFGLSAV AEQLRQDGLC HTFCGTPAYI APEVLTRKGY DAAKADVWSC GVILFVLMAG HIPFYDKNIM VMYKKIYKGE FRCPRWFSSD
301: LVRLLTRLLD TNPDTRITIP EIMKNRWFKK GFKHVKFYIE DDKLCREDED EEEEASSSGR SSTVSESDAE FDVKRMGIGS MPRPSSLNAF DIISFSSGFD
401: LSGLFEEEGG EGTRFVSGAP VSKIISKLEE IAKIVSFTVR KKEWSLRLEG CREGAKGPLT IAAEIFELTP SLVVVEVKKK GGDREEYEEF CNKELRPELE
501: KLIHEEVVVE EALYLPSDTE
Arabidopsis Description
CIPK18Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:A0A178WD98]
SUBAcon: [cytosol,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.