Factsheet for Solyc11g062410.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400082382	Potato	cytosol	98.17	92.26
VIT_06s0009g01840.t01	Wine grape	cytosol	90.85	90.43
Solyc01g008850.2.1	Tomato	plastid	88.56	88.36
GSMUA_Achr11P...	Banana	cytosol	85.58	85.19
GSMUA_Achr7P21500_001	Banana	cytosol	86.04	84.49
Os12t0132200-01	Rice	cytosol	48.74	82.88
OQU82814	Sorghum	cytosol	83.07	82.5
KRH14660	Soybean	cytosol	87.19	82.47
Bra034315.1-P	Field mustard	cytosol, mitochondrion	82.84	82.27
CDX77058	Canola	cytosol, mitochondrion	82.84	82.27
CDY48189	Canola	cytosol, mitochondrion	82.84	82.27
HORVU4Hr1G026300.12	Barley	cytosol	81.46	80.91
TraesCS4B01G131000.1	Wheat	cytosol	81.24	80.87
TraesCS4D01G126200.1	Wheat	cytosol	81.01	80.64
TraesCS4A01G187300.1	Wheat	cytosol	81.01	80.64
EES16537	Sorghum	cytosol	73.91	80.15
AT2G26980.4	Thale cress	cytosol	82.15	79.6
KRH73488	Soybean	cytosol	85.81	79.45
Os11t0134300-01	Rice	cytosol	73.46	79.26
Zm00001d052416_P002	Maize	cytosol	82.38	79.12
CDY16600	Canola	cytosol	78.95	78.41
AT5G21326.1	Thale cress	cytosol	78.72	78.36
CDX92400	Canola	cytosol	78.95	78.23
Bra002369.1-P	Field mustard	cytosol	78.72	78.0
GSMUA_Achr3P09340_001	Banana	cytosol, mitochondrion	78.72	76.96
CDY09107	Canola	cytosol	74.14	73.47
Bra020156.1-P	Field mustard	cytosol	74.14	73.47
Zm00001d044642_P001	Maize	nucleus	37.3	70.56
Solyc02g021440.2.1	Tomato	cytosol	71.4	68.27
Solyc05g047600.2.1	Tomato	cytosol	68.65	66.52
Solyc12g009570.1.1	Tomato	cytosol	62.24	60.99
Zm00001d044644_P001	Maize	cytosol	40.73	60.54
Solyc04g076810.2.1	Tomato	cytosol	57.44	56.15
Solyc05g053210.2.1	Tomato	cytosol	50.11	47.61
Solyc12g098910.1.1	Tomato	cytosol	50.34	47.11
Solyc03g115700.2.1	Tomato	cytosol, nucleus	35.01	30.36
Solyc02g067030.2.1	Tomato	cytosol, nucleus	35.7	30.35

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.5.3	Gene3D:3.30.200.20	Gene3D:3.30.310.80	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:IPR018451	UniProt:K4D952
InterPro:Kinase-like_dom_sf	InterPro:NAF/FISL_domain	InterPro:NAF_dom	PFAM:PF00069	PFAM:PF03822	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50816	PANTHER:PTHR24343	PANTHER:PTHR24343:SF189
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc11g062410.1
EnsemblPlants:Solyc11g062410.1.1	UniParc:UPI0002769543	:	:	:	:

Description

Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:K4D952]

Coordinates

chr11:-:49435642..49441638

Molecular Weight (calculated)

49888.0 Da

IEP (calculated)

7.429

GRAVY (calculated)

-0.435

Length

437 amino acids

Sequence
(BLAST)

001: MNQAKIKRRV GKYEMGRTIG EGTFAKVKFA RNSETGEAVA IKILDKDKVL KHKMAEQIKR EIATMKLIRH PHVVQLYEVL ASKTKIFIVL EFVTGGELFD
101: KIVNHGRMHE KEARKYFQQL INAVDYCHSR GVYHRDLKPE NLLLDVNGNL KVSDFGLSAL SQQVRDDGLL HTTCGTPNYV APEVLNDHGY DGTTADLWSC
201: GVILFVLLAG YLPFDDSNLI NLYKKISAAE FTCPPWMSFG AMKLITRILD PNPMTRITIS EILEDEWFKK DYKSPIFNEK GDANLDDVEA VFKDSEEHHV
301: TEKKEEQPTP MNAFELISMS KGLNLGNLFD EQEFKRETRF TSKCSANEII SKIEEAAKPL GFDVHKKNYK MRLENVKAGR KGNLNVATEV FQVAPSLHMV
401: EVRKAKGDTL EFHKFYKNLS TSLEDVVWKT EEDMQAR

Best Arabidopsis Sequence Match ( AT2G26980.4 )
(BLAST)

001: MLIPNKKLRE MNRRQQVKRR VGKYEVGRTI GEGTFAKVKF ARNSETGEPV ALKILDKEKV LKHKMAEQIR REIATMKLIK HPNVVQLYEV MASKTKIFII
101: LEYVTGGELF DKIVNDGRMK EDEARRYFQQ LIHAVDYCHS RGVYHRDLKP ENLLLDSYGN LKISDFGLSA LSQQVRDDGL LHTSCGTPNY VAPEVLNDRG
201: YDGATADMWS CGVVLYVLLA GYLPFDDSNL MNLYKKISSG EFNCPPWLSL GAMKLITRIL DPNPMTRVTP QEVFEDEWFK KDYKPPVFEE RDDSNMDDID
301: AVFKDSEEHL VTEKREEQPA AINAFEIISM SRGLNLENLF DPEQEFKRET RITLRGGANE IIEKIEEAAK PLGFDVQKKN YKMRLENVKA GRKGNLNVAT
401: EIFQVAPSLH MVQVSKSKGD TLEFHKFYKK LSNSLEQVVW TNNEVKKETA K

Arabidopsis Description

CIPK3Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:F4IVM7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.