Factsheet for Os11t0547000-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0182600-03
Os02t0551100-01
Os02t0618200-01
Os03t0169600-01
Os04t0432000-02
Os07t0685000-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G68050.1	Os01t0182600-03	AT1G22770.1	17704763
AT1G68050.1	Os01t0182600-03	AT1G22770.1	17872410
AT1G68050.1	Os03t0169600-01	AT3G47500.1	16002617
AT1G68050.1	Os07t0685000-02	AT3G47500.1	16002617
AT1G68050.1	Os02t0551100-01	AT5G08590.1	14749489
AT1G68050.1	Os04t0432000-02	AT5G08590.1	14749489
AT1G68050.1	Os02t0551100-01	AT5G08590.1	17872410
AT1G68050.1	Os04t0432000-02	AT5G08590.1	17872410
AT1G68050.1	Os02t0551100-01	AT5G08590.1	21798944
AT1G68050.1	Os04t0432000-02	AT5G08590.1	21798944
AT1G68050.1	Os02t0618200-01	AT5G61380.1	14654842
AT1G68050.1	Os03t0169600-01	AT5G62430.1	16002617
AT1G68050.1	Os07t0685000-02	AT5G62430.1	16002617

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU83614	Sorghum	cytosol	84.44	89.56
Zm00001d053091_P001	Maize	cytosol	85.24	86.89
Zm00001d007445_P001	Maize	cytosol	83.97	86.86
TraesCS4B01G157500.1	Wheat	cytosol	80.79	82.1
TraesCS4A01G164000.1	Wheat	cytosol	80.95	81.47
GSMUA_Achr7P11200_001	Banana	cytosol	69.68	76.75
KRH60424	Soybean	cytosol	71.59	72.74
VIT_01s0011g05810.t01	Wine grape	cytosol	71.11	72.73
AT1G68050.1	Thale cress	cytosol	70.16	71.41
KRH41723	Soybean	cytosol, extracellular, nucleus	71.43	69.55
PGSC0003DMT400051416	Potato	cytosol	69.52	69.09
Solyc01g005300.2.1	Tomato	cytosol	63.97	66.39
Os02t0150800-01	Rice	cytosol	61.75	62.44
Os06t0694000-01	Rice	cytosol	62.38	62.38
Os08t0230300-00	Rice	cytosol, endoplasmic reticulum, nucleus	16.98	23.88

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.4	Gene3D:2.120.10.80	MapMan:26.1.2.3.1	Gene3D:3.30.450.20	EntrezGene:4350698
ProteinID:ABA94231.2	EMBL:AK100677	ProteinID:BAF28431.2	ProteinID:BAT14389.1	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
GO:GO:0000003	GO:GO:0003674	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0006464
GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0007623	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009628	GO:GO:0009637	GO:GO:0009791	GO:GO:0009881	GO:GO:0009908
GO:GO:0009911	GO:GO:0009987	GO:GO:0010468	GO:GO:0016567	GO:GO:0018298	GO:GO:0019538
GO:GO:0038023	GO:GO:0048511	GO:GO:0050896	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR000014	InterPro:IPR001810
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_2	EnsemblPlantsGene:Os11g0547000	EnsemblPlants:Os11t0547000-01	InterPro:PAS
InterPro:PAS-like_dom_sf	PFAM:PF00646	PFAM:PF07646	PFAM:PF13415	PFAM:PF13418	PFAM:PF13426
PFscan:PS50112	PANTHER:PTHR23244	PANTHER:PTHR23244:SF263	UniProt:Q2R2W1	SUPFAM:SSF50965	SUPFAM:SSF55785
SUPFAM:SSF81383	TIGRFAMs:TIGR00229	UniParc:UPI0000D89B13	RefSeq:XP_015617056.1	SEG:seg	:

Description

FLAVIN-BINDING, KELCH REPEAT, F BOX 1Autonomous floral activator, Promotion of flowering (Os11t0547000-01);Hypothetical conserved gene. (Os11t0547000-02)

Coordinates

chr11:-:20182486..20187327

Molecular Weight (calculated)

69583.9 Da

IEP (calculated)

5.416

GRAVY (calculated)

-0.261

Length

630 amino acids

Sequence
(BLAST)

001: MFDAGDRGGG GGVVAVKRMK LCEEEEEEEE GMEVDEEEEE VGWVWRPPGG LAGEDEAAAW EGRAAAIVVS DAVEVDFPVI YVNAAFEAAT GYRADEVLGR
101: NCRFLQFRDP RAQRRHPLVD PMVVSEIRRC LNEGIEFQGE LLNFRKDGAP LYNRLRLIPM HGDDGFVTHV IGIQLFSEAN IDLSNVSYPV YKQQSNHRPN
201: IQEINPASHE HIPKIQSSEY CCILQLSDEV LAHNILSRLS PRDVASIGSV CTRMHELTKN DHLRKMVCQN AWGRDVTVRL EMSTKMLGWG RLARELTTLE
301: AASWRKFTVG GRVEPSRCNF SACAVGNRLV LFGGEGVNMQ PMDDTFVLNL ESAKPEWRRV KVSASPPGRW GHTLSWLNGS WLVVFGGCGQ QGLLNDVFVL
401: DLDAKQPTWR EVASEGPPLP RSWHSSCTLD GSKLVVSGGC TESGVLLSDT FLLDLTKEKP AWKEIPTSWS PPSRLGHTLS VFGKTKLFMF GGLAKSGSLR
501: LRSCDAYTMD AGEDSPQWRQ LATTGFPSIG PPPRLDHVAV SLPCGRIIIF GGSIAGLHSP SQLFLLDPAE EKPTWRILNV PGQPPKFAWG HSTCVVGGTR
601: VLVLGGHTGE EWILNELHEL CLASRPDEDE

Best Arabidopsis Sequence Match ( AT1G68050.1 )
(BLAST)

001: MAREHAIGEA TGKRKKRGRV EEAEEYCNDG IEEQVEDEKL PLEVGMFYYP MTPPSFIVSD ALEPDFPLIY VNRVFEVFTG YRADEVLGRN CRFLQYRDPR
101: AQRRHPLVDP VVVSEIRRCL EEGIEFQGEL LNFRKDGTPL VNRLRLAPIR DDDGTITHVI GIQVFSETTI DLDRVSYPVF KHKQQLDQTS ECLFPSGSPR
201: FKEHHEDFCG ILQLSDEVLA HNILSRLTPR DVASIGSACR RLRQLTKNES VRKMVCQNAW GKEITGTLEI MTKKLRWGRL ARELTTLEAV CWRKFTVGGI
301: VQPSRCNFSA CAVGNRLVLF GGEGVNMQPL DDTFVLNLDA ECPEWQRVRV TSSPPGRWGH TLSCLNGSWL VVFGGCGRQG LLNDVFVLDL DAKHPTWKEV
401: AGGTPPLPRS WHSSCTIEGS KLVVSGGCTD AGVLLSDTFL LDLTTDKPTW KEIPTSWAPP SRLGHSLSVF GRTKILMFGG LANSGHLKLR SGEAYTIDLE
501: DEEPRWRELE CSAFPGVVVP PPRLDHVAVS MPCGRVIIFG GSIAGLHSPS QLFLIDPAEE KPSWRILNVP GKPPKLAWGH STCVVGGTRV LVLGGHTGEE
601: WILNELHELC LASRQDSDL

Arabidopsis Description

ADO3FKF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8F6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.