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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • plastid 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG90903
KRH11042
KRH21245
KRH35895
KRH42881
KRH52380
KRH58985
KRH61707

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G62000.1 KRG90903 AT1G15050.1 21734647
AT5G62000.1 KRH35895 AT1G15050.1 21734647
AT5G62000.1 KRH11042 AT4G18710.1 18599455
AT5G62000.1 KRH21245 AT4G18710.1 18599455
AT5G62000.1 KRH42881 AT4G18710.1 18599455
AT5G62000.1 KRH52380 AT4G18710.1 18599455
AT5G62000.1 KRH58985 AT4G18710.1 18599455
AT5G62000.1 KRH61707 AT4G18710.1 18599455
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH41062 Soybean nucleus 93.94 94.71
KRH54110 Soybean nucleus 79.14 80.55
KRH63855 Soybean nucleus 78.9 80.31
Os11t0523800-01 Rice nucleus 32.52 76.23
VIT_17s0000g00320.t01 Wine grape nucleus 73.31 72.97
PGSC0003DMT400037454 Potato nucleus 64.69 66.95
Solyc12g042070.1.1 Tomato nucleus 64.45 66.79
PGSC0003DMT400036765 Potato nucleus 65.03 66.04
Solyc03g118290.2.1 Tomato nucleus 64.8 65.72
AT5G62000.1 Thale cress nucleus 65.62 65.54
CDX86939 Canola nucleus 63.75 64.35
CDY00245 Canola nucleus 63.75 64.28
Bra010048.1-P Field mustard nucleus 63.75 64.28
CDY67247 Canola nucleus 63.52 64.04
CDX87230 Canola nucleus 61.77 64.01
GSMUA_Achr6P08090_001 Banana nucleus 60.02 62.5
GSMUA_Achr10P... Banana nucleus 58.51 60.92
Bra035910.1-P Field mustard nucleus 62.59 60.47
CDY16798 Canola nucleus 61.31 59.98
GSMUA_Achr6P16450_001 Banana nucleus 59.44 58.42
TraesCS3D01G434700.1 Wheat nucleus 52.45 56.53
TraesCS3B01G475800.1 Wheat nucleus 52.33 56.41
TraesCS3A01G442000.1 Wheat nucleus 52.33 56.34
OQU83539 Sorghum nucleus 52.8 55.58
GSMUA_AchrUn_... Banana nucleus 57.23 55.54
KXG34038 Sorghum nucleus 51.86 54.94
Os01t0927600-01 Rice nucleus 51.28 54.46
Zm00001d011953_P002 Maize nucleus 51.05 54.34
Os12t0479400-02 Rice nucleus 53.26 54.34
Zm00001d042267_P003 Maize nucleus 51.17 53.67
KRH26266 Soybean nucleus 40.44 52.18
KRH06026 Soybean nucleus 40.44 52.18
TraesCS3B01G486000.2 Wheat nucleus 49.88 51.82
Zm00001d049295_P001 Maize nucleus 52.8 51.71
KRH58711 Soybean nucleus 23.66 51.65
TraesCS3A01G449300.3 Wheat nucleus 49.88 51.63
KRH51289 Soybean nucleus 40.09 51.04
HORVU3Hr1G096410.4 Barley nucleus, plastid 47.67 50.87
HORVU3Hr1G097200.10 Barley nucleus 49.88 50.65
EES17013 Sorghum nucleus 49.42 50.54
Zm00001d041056_P019 Maize nucleus 48.48 49.29
HORVU3Hr1G096510.3 Barley plastid 47.9 49.28
Zm00001d023659_P007 Maize nucleus 47.32 49.15
TraesCS3D01G442000.7 Wheat nucleus 50.35 48.76
KRH00001 Soybean nucleus 37.53 48.49
KRH75716 Soybean nucleus 39.04 48.41
KRH49135 Soybean nucleus 37.41 48.34
KRH22924 Soybean nucleus 20.4 47.95
KRH65922 Soybean nucleus 38.23 47.47
KRH68924 Soybean nucleus 36.01 46.68
KRH06451 Soybean nucleus 38.34 45.95
KRH47893 Soybean nucleus 37.76 45.25
KRH68102 Soybean nucleus 28.09 40.85
KRG96367 Soybean nucleus 32.05 40.62
KRG89021 Soybean nucleus 34.62 37.5
KRH24914 Soybean nucleus 34.62 37.5
KRH26391 Soybean nucleus 34.03 36.55
KRG98044 Soybean nucleus 31.82 32.46
KRH17251 Soybean nucleus 31.82 32.38
KRH72896 Soybean nucleus 31.82 32.23
KRH30740 Soybean nucleus 31.7 32.23
KRH73577 Soybean nucleus 32.75 31.36
KRH14545 Soybean nucleus 32.17 30.8
KRH21113 Soybean nucleus 31.93 30.58
KRH11131 Soybean nucleus 31.7 30.29
KRH42603 Soybean nucleus 31.47 29.83
KRH17404 Soybean nucleus 30.42 28.06
KRH05923 Soybean nucleus 30.19 27.76
KRH19355 Soybean nucleus 32.4 24.58
KRH60117 Soybean nucleus 31.47 24.57
KRH02575 Soybean nucleus 32.52 24.56
KRH49070 Soybean nucleus 31.7 24.5
KRH74145 Soybean nucleus 31.12 24.18
KRH41404 Soybean nucleus 31.35 24.17
KRH12587 Soybean nucleus 31.24 23.89
KRH37536 Soybean nucleus 31.24 23.82
Protein Annotations
EntrezGene:100815956MapMan:15.5.5.1Gene3D:2.30.30.1040Gene3D:2.40.330.10Gene3D:3.10.20.90EMBL:ACUP02003341
InterPro:AUX/IAA_domInterPro:Auxin_respInterPro:B3_DNA-bdInterPro:DNA-bd_pseudobarrel_sfEnsemblPlantsGene:GLYMA_05G200800GO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0007154
GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009719GO:GO:0009725
GO:GO:0009734GO:GO:0009987UniProt:I1K6T1InterPro:IPR000270InterPro:IPR003340InterPro:IPR015300
EnsemblPlants:KRH59742ProteinID:KRH59742ProteinID:KRH59742.1ProteinID:KRH59743.1InterPro:PB1_domPFAM:PF02309
PFAM:PF02362PFAM:PF06507PFscan:PS50863PFscan:PS51745PANTHER:PTHR31384PANTHER:PTHR31384:SF8
SMART:SM01019SUPFAM:SSF101936SUPFAM:SSF54277UniParc:UPI00023399EESEG:seg:
Description
hypothetical protein
Coordinates
chr5:+:38463201..38468505
Molecular Weight (calculated)
94850.2 Da
IEP (calculated)
6.819
GRAVY (calculated)
-0.638
Length
858 amino acids
Sequence
(BLAST)
001: MATSEVSIKG NSVNGKGDNS SGGYTNDVRN GSGGGEARNS SSSSSSARDA EAALYRELWH ACAGPLVTVP REGERVFYFP QGHIEQVEAS TNQVAEQHMP
101: VYDLPPKILC RVINVMLKAE PDTDEVFAQV TLLPEPNQDE NAVEKEGPPA APPRFHVHSF CKTLTASDTS THGGFSVLRR HADECLPPLD MTKQPPTQEL
201: VAKDLHGNEW RFRHIFRGQP RRHLLQSGWS VFVSSKRLVA GDAFIFLRGE NGELRVGVRR AMRQQGNVPS SVISSHSMHL GVLATAWHAI LTGTMFTVYY
301: KPRTSPAEFI VPYDQYMESL KNNYTIGMRF KMRFEGEEAP EQRFTGTIVG IEDADTKRWP KSKWRSLKVR WDETSNIPRP ERVSQWKIEP ALAPPALNPL
401: PMPRPKRPRS NVVPSSPDSS VLTREASSKV SVDPLPTSGF QRVLQGQELS TLRGNFAESN ESDTVEKSAV WPPVADDEKI DVSTSRRYGS DSWMSMGRHE
501: LTYPDLLSGF GTHGDHSSHP SFVDQNGPVA NVGRKHLLDC EGKHNVLSPW SGVPSSLSLN LLDSNTKGSA QGGDTTYQVR GNLRYSSAFG EYPMLHGHKV
601: EHSHGNFLMP PPPSTPYESP RSRELLPKPI SGKPCEVSKP KDSDCKLFGI SLLSSPIAPE PSVSQRNVPS EPVGHMHTTS HQQRAFDNDQ KSEHSRGGSK
701: PADGLLIDDH EKVLQTSQTH LKDIQAKSHS GSARSCTKVH KKGIALGRSV DLTKFSDYGE LIAELDQLFE FGGLLTSPQK DWLIVYTDNE GDMMLVGDDP
801: WQEFVAMVRK IYIYPKEEIQ KMSPGTLSSK NEENQSASEG ATDTQEIKCQ LNNSASDT
Best Arabidopsis Sequence Match ( AT5G62000.2 )
(BLAST)
001: MASSEVSMKG NRGGDNFSSS GFSDPKETRN VSVAGEGQKS NSTRSAAAER ALDPEAALYR ELWHACAGPL VTVPRQDDRV FYFPQGHIEQ VEASTNQAAE
101: QQMPLYDLPS KLLCRVINVD LKAEADTDEV YAQITLLPEA NQDENAIEKE APLPPPPRFQ VHSFCKTLTA SDTSTHGGFS VLRRHADECL PPLDMSRQPP
201: TQELVAKDLH ANEWRFRHIF RGQPRRHLLQ SGWSVFVSSK RLVAGDAFIF LRGENGELRV GVRRAMRQQG NVPSSVISSH SMHLGVLATA WHAISTGTMF
301: TVYYKPRTSP SEFIVPFDQY MESVKNNYSI GMRFKMRFEG EEAPEQRFTG TIVGIEESDP TRWPKSKWRS LKVRWDETSS IPRPDRVSPW KVEPALAPPA
401: LSPVPMPRPK RPRSNIAPSS PDSSMLTREG TTKANMDPLP ASGLSRVLQG QEYSTLRTKH TESVECDAPE NSVVWQSSAD DDKVDVVSGS RRYGSENWMS
501: SARHEPTYTD LLSGFGTNID PSHGQRIPFY DHSSSPSMPA KRILSDSEGK FDYLANQWQM IHSGLSLKLH ESPKVPAATD ASLQGRCNVK YSEYPVLNGL
601: STENAGGNWP IRPRALNYYE EVVNAQAQAQ AREQVTKQPF TIQEETAKSR EGNCRLFGIP LTNNMNGTDS TMSQRNNLND AAGLTQIASP KVQDLSDQSK
701: GSKSTNDHRE QGRPFQTNNP HPKDAQTKTN SSRSCTKVHK QGIALGRSVD LSKFQNYEEL VAELDRLFEF NGELMAPKKD WLIVYTDEEN DMMLVGDDPW
801: QEFCCMVRKI FIYTKEEVRK MNPGTLSCRS EEEAVVGEGS DAKDAKSASN PSLSSAGNS
Arabidopsis Description
ARF2Auxin response factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94JM3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.