Factsheet for TraesCS7A01G215400.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G119200.1	Wheat	nucleus	93.3	92.27
TraesCS3B01G138400.1	Wheat	nucleus	86.03	71.63
TraesCS4A01G072000.1	Wheat	nucleus	85.47	68.61
TraesCS7A01G215300.1	Wheat	nucleus	64.25	67.25
TraesCS7D01G217200.1	Wheat	nucleus	75.98	60.99
HORVU3Hr1G022070.1	Barley	nucleus	61.45	58.2
TraesCS7A01G168100.1	Wheat	nucleus	20.67	25.17
TraesCS7A01G168000.1	Wheat	nucleus	16.2	21.32
TraesCS5A01G330200.1	Wheat	nucleus	31.28	7.53
TraesCS6A01G255800.1	Wheat	nucleus	33.52	7.46
TraesCS6A01G324500.1	Wheat	nucleus	25.7	6.72
TraesCS5A01G314400.2	Wheat	nucleus	31.28	6.6
TraesCS7A01G308400.1	Wheat	nucleus	29.05	6.53
TraesCS4A01G231300.2	Wheat	nucleus	27.93	6.48
TraesCS7A01G167900.1	Wheat	nucleus	25.7	6.34
TraesCS2A01G474000.1	Wheat	nucleus	27.37	6.31
TraesCS2A01G401200.3	Wheat	nucleus	26.82	6.0
TraesCS3A01G305300.1	Wheat	nucleus	24.02	5.65
TraesCS3A01G325800.1	Wheat	nucleus	20.67	5.42
TraesCS1A01G193400.1	Wheat	nucleus, plastid	26.26	5.38
Solyc11g022410.1.1	Tomato	extracellular	0.56	1.35

Protein Annotations

EnsemblPlants:TraesCS7A01G215400.1	EnsemblPlantsGene:TraesCS7A01G215400	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0043565	InterPro:Cro/C1-type_HTH	InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:IPR001387
PANTHER:PTHR24326	PANTHER:PTHR24326:SF343	PFAM:PF00046	TIGR:cd00093	MapMan:15.5.3.3	:

Description

No Description!

Coordinates

chr7A:+:181050560..181051586

Molecular Weight (calculated)

20974.7 Da

IEP (calculated)

6.888

GRAVY (calculated)

-1.012

Length

179 amino acids

Sequence
(BLAST)

001: MDGEWLQYNS GVHNKFDLFM TSKHNHLFQD NHSDEMDGLL EATTVVGNTD DANIVATDHN NNDGETHNEK LQKDLSERLG MSAQQVKFWF QNKSTFSKGK
101: MQRWETQNRW VENERLKTER QAIMLAMQNK TCLKCRGVMV QTQDTSERQR LYTENMRLKE ELLHATAYLK EGLRRNGMS

Best Arabidopsis Sequence Match ( AT3G61150.1 )
(BLAST)

001: MNFNGFLDDG AGASKLLSDA PYNNHFSFSA VDTMLGSAAI APSQSLPFSS SGLSLGLQTN GEMSRNGEIM ESNVSRKSSR GEDVESRSES DNAEAVSGDD
101: LDTSDRPLKK KKRYHRHTPK QIQDLESVFK ECAHPDEKQR LDLSRRLNLD PRQVKFWFQN RRTQMKTQIE RHENALLRQE NDKLRAENMS VREAMRNPMC
201: GNCGGPAVIG EISMEEQHLR IENSRLKDEL DRVCALTGKF LGRSNGSHHI PDSALVLGVG VGSGGCNVGG GFTLSSPLLP QASPRFEISN GTGSGLVATV
301: NRQQPVSVSD FDQRSRYLDL ALAAMDELVK MAQTREPLWV RSSDSGFEVL NQEEYDTSFS RCVGPKQDGF VSEASKEAGT VIINSLALVE TLMDSERWAE
401: MFPSMVSRTS TTEIISSGMG GRNGALHLMH AELQLLSPLV PVRQVSFLRF CKQHAEGVWA VVDVSIDSIR EGSSSSCRRL PSGCLVQDMA NGYSKVTWIE
501: HTEYDENHIH RLYRPLLRCG LAFGAHRWMA ALQRQCECLT ILMSSTVSTS TNPSPINCNG RKSMLKLAKR MTDNFCGGVC ASSLQKWSKL NVGNVDEDVR
601: IMTRKSVNNP GEPPGIILNA ATSVWMPVSP RRLFDFLGNE RLRSEWDILS NGGPMKEMAH IAKGHDRSNS VSLLRASAIN ANQSSMLILQ ETSIDAAGAV
701: VVYAPVDIPA MQAVMNGGDS AYVALLPSGF AILPNGQAGT QRCAAEERNS IGNGGCMEEG GSLLTVAFQI LVNSLPTAKL TVESVETVNN LISCTVQKIK
801: AALHCDST

Arabidopsis Description

HDG1HDG1 [Source:UniProtKB/TrEMBL;Acc:A0A178V5Q4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.