Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g066810.2.1 | Tomato | cytosol | 93.63 | 93.04 |
| PGSC0003DMT400021775 | Potato | cytosol | 68.79 | 71.05 |
| PGSC0003DMT400061758 | Potato | cytosol | 62.42 | 62.42 |
| PGSC0003DMT400011994 | Potato | cytosol | 63.06 | 61.88 |
| VIT_05s0020g01190.t01 | Wine grape | cytosol | 59.24 | 58.86 |
| PGSC0003DMT400037920 | Potato | cytosol | 58.6 | 57.14 |
| KRH22975 | Soybean | cytosol, peroxisome, plastid | 57.32 | 54.88 |
| Bra020665.1-P | Field mustard | cytosol | 52.87 | 49.7 |
| CDY05645 | Canola | cytosol | 52.23 | 49.1 |
| CDY33932 | Canola | cytosol | 52.23 | 49.1 |
| PGSC0003DMT400007287 | Potato | cytosol | 41.4 | 39.16 |
| AT5G49050.1 | Thale cress | cytosol | 31.21 | 32.67 |
| PGSC0003DMT400084231 | Potato | cytosol | 35.03 | 30.73 |
| PGSC0003DMT400033576 | Potato | cytosol | 29.3 | 26.74 |
| PGSC0003DMT400080606 | Potato | cytosol | 26.11 | 23.43 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400029496 | EnsemblPlantsGene:PGSC0003DMG400011342 | EntrezGene:102582699 | Gene3D:3.40.50.620 | GO:GO:0006950 | GO:GO:0008150 |
| InterPro:IPR014729 | InterPro:Rossmann-like_a/b/a_fold | InterPro:Universal_stress_UspA | InterPro:UspA | PANTHER:PTHR31964 | PANTHER:PTHR31964:SF16 |
| PFAM:PF00582 | PGSC:PGSC0003DMG400011342 | PRINTS:PR01438 | RefSeq:XP_006342804.1 | SUPFAM:SSF52402 | UniParc:UPI000295A45A |
| UniProt:M1ASX0 | MapMan:35.2 | : | : | : | : |
Description
Fiber protein Fb19 [Source:PGSC_GENE;Acc:PGSC0003DMG400011342]
Coordinates
chr1:-:57895120..57896372
Molecular Weight (calculated)
16994.5 Da
IEP (calculated)
7.572
GRAVY (calculated)
0.064
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATQTMIFA LDDTDHSFYA LEWTLDHFFG ASDSLFKLII VHVKTTPTSV VGLAGPGTSD VLVVVEKDIK KTAQRVCEKS KQLCEAKGVN GVEFDVVEGD
101: ARNVLCDAVD KHHAAILVMG SHGYGAFKRA VLGSVSDYCS HHARCSVMIV KKPKAKN
101: ARNVLCDAVD KHHAAILVMG SHGYGAFKRA VLGSVSDYCS HHARCSVMIV KKPKAKN
001: MATGDGKSVM VVGVDDSEQS TYALEWTLDR FFAPYAPNYP FKLFIVHAKP NAVSAVGLAG PGTAEVVPYV DADLKHTAAK VVEKAKAICQ SRSVHGAVIE
101: VFEGDARNIL CEVVDKHHAS ILVVGSHGYG AIKRAVLGST SDYCAHHAHC SVMIVKKPKI KV
101: VFEGDARNIL CEVVDKHHAS ILVVGSHGYG AIKRAVLGST SDYCAHHAHC SVMIVKKPKI KV
Arabidopsis Description
Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:O82240]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.