Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- peroxisome 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g100370.2.1 | Tomato | cytosol | 95.18 | 95.18 |
| KRH33831 | Soybean | endoplasmic reticulum | 68.67 | 70.37 |
| VIT_14s0060g01300.t01 | Wine grape | cytosol | 69.28 | 67.65 |
| KRH68444 | Soybean | cytosol | 66.27 | 62.15 |
| KRG96728 | Soybean | cytosol | 65.66 | 61.58 |
| VIT_14s0060g01320.t01 | Wine grape | cytosol | 67.47 | 55.17 |
| Zm00001d009118_P001 | Maize | cytosol, extracellular, plasma membrane | 54.82 | 55.15 |
| EES00637 | Sorghum | cytosol | 54.22 | 54.55 |
| Os01t0303800-02 | Rice | plasma membrane | 54.82 | 50.0 |
| Zm00001d025142_P001 | Maize | cytosol, plastid | 50.6 | 47.46 |
| PGSC0003DMT400029496 | Potato | cytosol | 39.16 | 41.4 |
| PGSC0003DMT400061758 | Potato | cytosol | 38.55 | 40.76 |
| EER92231 | Sorghum | plastid | 47.59 | 40.72 |
| PGSC0003DMT400021775 | Potato | cytosol | 36.75 | 40.13 |
| PGSC0003DMT400037920 | Potato | cytosol | 38.55 | 39.75 |
| PGSC0003DMT400011994 | Potato | cytosol | 36.75 | 38.12 |
| PGSC0003DMT400084231 | Potato | cytosol | 39.16 | 36.31 |
| PGSC0003DMT400033576 | Potato | cytosol | 29.52 | 28.49 |
| PGSC0003DMT400080606 | Potato | cytosol | 27.11 | 25.71 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400007287 | EnsemblPlantsGene:PGSC0003DMG400002804 | EntrezGene:102603140 | Gene3D:3.40.50.620 | GO:GO:0006950 | GO:GO:0008150 |
| InterPro:IPR014729 | InterPro:Rossmann-like_a/b/a_fold | InterPro:Universal_stress_UspA | InterPro:UspA | PANTHER:PTHR31964 | PANTHER:PTHR31964:SF119 |
| PFAM:PF00582 | PGSC:PGSC0003DMG400002804 | PRINTS:PR01438 | RefSeq:XP_006344751.1 | SUPFAM:SSF52402 | UniParc:UPI000296F6BB |
| UniProt:M0ZSR5 | MapMan:35.2 | : | : | : | : |
Description
USP [Source:PGSC_GENE;Acc:PGSC0003DMG400002804]
Coordinates
chr1:+:78074527..78076466
Molecular Weight (calculated)
18139.9 Da
IEP (calculated)
6.898
GRAVY (calculated)
-0.054
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MADAAAKERK ILVAVDESEE SSYALSWCIE NIITGNSNDT LILLYSIPPR AVYSTLDGTG YLFSSDILAT MERYSSEVAQ CVMEKAKRAC EALNGVKVET
101: IVEHGDARDV ICQAAEKLHV DMLVMGSHGY GVIKRAFLGS VSNHCAQNVK CPVLIVKKPK TDGRRK
101: IVEHGDARDV ICQAAEKLHV DMLVMGSHGY GVIKRAFLGS VSNHCAQNVK CPVLIVKKPK TDGRRK
001: MEETKERKIV VAVDESEESM EALSWSLDNL FPYGSNNTLI LLYVKPPLPV YSSLDAAGFI VTGDPVAALK KYEYELVESV MARSRTVYQD YESDINIERR
101: VGRGDAKEVI CNAVQKLRVD MLVMGTHDYG FFKRALLGSV SEYCAKRVKC PVVIVKKQAQ DN
101: VGRGDAKEVI CNAVQKLRVD MLVMGTHDYG FFKRALLGSV SEYCAKRVKC PVVIVKKQAQ DN
Arabidopsis Description
Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q93W91]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.