Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G069090.1 | Barley | nucleus | 64.77 | 39.48 |
| Os02t0706600-00 | Rice | nucleus | 42.7 | 28.1 |
| Zm00001d017784_P001 | Maize | nucleus | 36.65 | 24.7 |
| Zm00001d051573_P001 | Maize | nucleus | 37.37 | 23.54 |
| HORVU5Hr1G045580.1 | Barley | cytosol | 7.12 | 21.28 |
| KXG30914 | Sorghum | nucleus | 29.54 | 20.44 |
| HORVU1Hr1G013140.1 | Barley | cytosol | 5.34 | 20.0 |
| HORVU3Hr1G096990.1 | Barley | cytosol | 6.76 | 19.19 |
| GSMUA_Achr10P... | Banana | nucleus | 17.44 | 18.49 |
| GSMUA_Achr2P23010_001 | Banana | nucleus | 18.15 | 17.53 |
| HORVU1Hr1G091470.1 | Barley | nucleus | 13.17 | 15.74 |
| KRH76785 | Soybean | nucleus | 14.95 | 13.25 |
| KRH28682 | Soybean | nucleus | 15.66 | 13.1 |
| PGSC0003DMT400009581 | Potato | nucleus | 13.17 | 13.03 |
| Solyc04g080490.2.1 | Tomato | nucleus | 12.46 | 12.07 |
| VIT_18s0001g12580.t01 | Wine grape | nucleus | 13.52 | 12.03 |
| HORVU5Hr1G069730.1 | Barley | nucleus | 12.81 | 11.92 |
| CDY37252 | Canola | nucleus | 11.03 | 11.88 |
| AT2G18350.1 | Thale cress | nucleus | 11.03 | 11.83 |
| CDY62531 | Canola | nucleus | 11.03 | 11.79 |
| KRH69909 | Soybean | nucleus | 13.88 | 11.68 |
| CDY70550 | Canola | nucleus | 10.68 | 11.67 |
| KRH08258 | Soybean | nucleus | 13.52 | 11.55 |
| CDY70108 | Canola | nucleus | 10.68 | 11.32 |
| CDX90679 | Canola | nucleus | 9.61 | 11.11 |
| Bra037224.1-P | Field mustard | nucleus | 10.32 | 10.94 |
| Bra008185.1-P | Field mustard | nucleus | 11.39 | 10.88 |
| AT3G50890.1 | Thale cress | nucleus | 9.61 | 10.84 |
| CDY45419 | Canola | nucleus | 11.03 | 10.76 |
| CDX73152 | Canola | nucleus | 11.39 | 10.7 |
| CDY28987 | Canola | nucleus | 9.25 | 10.61 |
| Bra015857.1-P | Field mustard | nucleus | 11.39 | 10.6 |
| CDX85886 | Canola | nucleus | 11.03 | 10.54 |
| CDY71124 | Canola | nucleus | 9.61 | 10.51 |
| Bra036852.1-P | Field mustard | nucleus | 8.19 | 10.5 |
| CDX77960 | Canola | nucleus | 8.19 | 10.5 |
| AT1G75240.1 | Thale cress | nucleus | 11.39 | 10.36 |
| HORVU2Hr1G075950.1 | Barley | nucleus | 10.68 | 10.27 |
| Solyc02g085160.1.1 | Tomato | nucleus | 10.68 | 10.24 |
| CDX73775 | Canola | nucleus | 7.83 | 10.23 |
| Bra003759.1-P | Field mustard | nucleus | 10.68 | 10.2 |
| CDX68137 | Canola | nucleus | 10.68 | 10.1 |
| HORVU4Hr1G008360.1 | Barley | cytosol, mitochondrion, nucleus | 8.54 | 10.0 |
| PGSC0003DMT400009033 | Potato | nucleus | 10.68 | 9.93 |
| Bra012882.1-P | Field mustard | nucleus | 9.25 | 9.81 |
| HORVU4Hr1G015250.6 | Barley | nucleus, plastid | 13.52 | 9.05 |
| VIT_04s0023g01880.t01 | Wine grape | nucleus | 12.1 | 7.85 |
| HORVU5Hr1G065740.1 | Barley | nucleus | 9.96 | 7.25 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G069070.1 | EnsemblPlantsGene:HORVU6Hr1G069070 | InterPro:IPR006456 | InterPro:ZF_HD_homeobox_Cys/His_dimer | PANTHER:PTHR31948 | PANTHER:PTHR31948:SF11 |
| PFAM:PD125774 | PFAM:PF04770 | PFscan:PS51523 | SEG:seg | TIGRFAMs:TIGR01566 | UniParc:UPI000B47B9E2 |
| UniProt:A0A287UJS5 | MapMan:15.5.3.13 | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:-:478341815..478342875
Molecular Weight (calculated)
26134.0 Da
IEP (calculated)
11.693
GRAVY (calculated)
-0.706
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MHGRAPQVLG SPAAAASSPS SLMEAAAFSR PLLPPNSSLV SSPPPPPQAP PGFLLPQHQH PNRRRMDSER ERERTVEAAP GEAHRQHHHQ QQPQHQRQRQ
101: HEPARNGVLG GGAMPPPPPT LAIVTGSSTR APGEHGGATG PEPLPWRYRE CLRNHAARMG AHVLDGCGEF MPSPGDGVAA XXXXXXXXXX XXXXXXXXXX
201: XXXXXXXXXX XXXXAGLRPS SAETRSRGKT MEVFGRAAVR KSSQICPKSP IYIGGGRGTL PWGPRDSQGV GRAKGGRTPP P
101: HEPARNGVLG GGAMPPPPPT LAIVTGSSTR APGEHGGATG PEPLPWRYRE CLRNHAARMG AHVLDGCGEF MPSPGDGVAA XXXXXXXXXX XXXXXXXXXX
201: XXXXXXXXXX XXXXAGLRPS SAETRSRGKT MEVFGRAAVR KSSQICPKSP IYIGGGRGTL PWGPRDSQGV GRAKGGRTPP P
001: MEIASQEDPI PINTSYGNSG GGHGNMNHHH HANSAPSSLN ITTSNPLLVS SNSNGLGKNH DHSHHHHVGY NIMVTNIKKE KPVVIKYKEC LKNHAATMGG
101: NAIDGCGEFM PSGEEGSIEA LTCSVCNCHR NFHRRETEGE EKTFFSPYLN HHQPPPQQRK LMFHHKMIKS PLPQQMIMPI GVTTAGSNSE SEDLMEEEGG
201: GSLTFRQPPP PPSPYSYGHN QKKRFRTKFT QEQKEKMISF AERVGWKIQR QEESVVQQLC QEIGIRRRVL KVWMHNNKQN LSKKSNNVSN NVDLSAGNND
301: ITENLASTNP
101: NAIDGCGEFM PSGEEGSIEA LTCSVCNCHR NFHRRETEGE EKTFFSPYLN HHQPPPQQRK LMFHHKMIKS PLPQQMIMPI GVTTAGSNSE SEDLMEEEGG
201: GSLTFRQPPP PPSPYSYGHN QKKRFRTKFT QEQKEKMISF AERVGWKIQR QEESVVQQLC QEIGIRRRVL KVWMHNNKQN LSKKSNNVSN NVDLSAGNND
301: ITENLASTNP
Arabidopsis Description
ZHD3Zinc-finger homeodomain protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O64722]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.