Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G484100.1 | Wheat | cytosol | 64.65 | 66.67 |
| TraesCS3A01G448100.1 | Wheat | cytosol | 64.65 | 66.67 |
| TraesCS3A01G448000.1 | Wheat | cytosol | 64.65 | 66.67 |
| VIT_17s0000g06200.t01 | Wine grape | cytosol | 22.22 | 44.9 |
| EES16563 | Sorghum | cytosol | 33.33 | 35.87 |
| HORVU5Hr1G045580.1 | Barley | cytosol | 32.32 | 34.04 |
| Zm00001d044662_P001 | Maize | cytosol, plastid | 34.34 | 34.0 |
| EES07913 | Sorghum | cytosol | 33.33 | 33.67 |
| Zm00001d023289_P001 | Maize | cytosol | 33.33 | 33.67 |
| Zm00001d023286_P001 | Maize | cytosol | 33.33 | 33.67 |
| Os12t0124500-01 | Rice | cytosol, plastid | 34.34 | 32.38 |
| KRH40100 | Soybean | mitochondrion | 29.29 | 30.21 |
| KRH40102 | Soybean | cytosol, mitochondrion | 22.22 | 30.14 |
| KRH01145 | Soybean | cytosol | 22.22 | 29.33 |
| KRH40101 | Soybean | mitochondrion | 26.26 | 26.8 |
| KRH01146 | Soybean | cytosol | 26.26 | 26.53 |
| HORVU1Hr1G013140.1 | Barley | cytosol | 19.19 | 25.33 |
| Solyc01g103820.1.1 | Tomato | cytosol | 20.2 | 21.28 |
| PGSC0003DMT400090846 | Potato | cytosol | 25.25 | 20.66 |
| PGSC0003DMT400086860 | Potato | cytosol | 24.24 | 20.17 |
| Solyc05g018740.1.1 | Tomato | cytosol | 23.23 | 19.33 |
| Solyc01g103810.1.1 | Tomato | cytosol | 21.21 | 18.1 |
| Solyc05g020000.1.1 | Tomato | cytosol | 19.19 | 15.97 |
| HORVU1Hr1G091470.1 | Barley | nucleus | 36.36 | 15.32 |
| HORVU5Hr1G069730.1 | Barley | nucleus | 38.38 | 12.58 |
| HORVU4Hr1G008360.1 | Barley | cytosol, mitochondrion, nucleus | 28.28 | 11.67 |
| HORVU2Hr1G075950.1 | Barley | nucleus | 31.31 | 10.62 |
| HORVU4Hr1G015250.6 | Barley | nucleus, plastid | 35.35 | 8.33 |
| HORVU5Hr1G065740.1 | Barley | nucleus | 32.32 | 8.29 |
| HORVU6Hr1G069090.1 | Barley | nucleus | 34.34 | 7.38 |
| HORVU6Hr1G069070.1 | Barley | plastid | 19.19 | 6.76 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G096990.1 | EnsemblPlantsGene:HORVU3Hr1G096990 | InterPro:IPR006456 | InterPro:ZF_HD_homeobox_Cys/His_dimer | PANTHER:PTHR31948 | PANTHER:PTHR31948:SF45 |
| PFAM:PD125774 | PFAM:PF04770 | PFscan:PS51523 | TIGRFAMs:TIGR01566 | UniParc:UPI000B471530 | UniProt:A0A287MFN0 |
| MapMan:15.5.3.13 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:654844432..654845132
Molecular Weight (calculated)
10793.8 Da
IEP (calculated)
8.788
GRAVY (calculated)
-0.631
Length
99 amino acids
Sequence
(BLAST)
(BLAST)
1: MGPRQDRSAV DGGQGNGARP AIVRYRECQR NLLAGNGRHV VDGCQGFMAS IGVDEATTFL CAACGCHRSF HRREVVDEFG VDYHAPGNAP RQRKPPLKQ
001: MEVREKKDEK MEMTRRKSSA LDHHRLPPYT YSQTANKEKP TTKRNGSDPD PDPDLDTNPI SISHAPRSYA RPQTTSPGKA RYRECQKNHA ASSGGHVVDG
101: CGEFMSSGEE GTVESLLCAA CDCHRSFHRK EIDGLFVVNF NSFGHSQRPL GSRHVSPIMM SFGGGGGCAA ESSTEDLNKF HQSFSGYGVD QFHHYQPKKR
201: FRTKFNEEQK EKMMEFAEKI GWRMTKLEDD EVNRFCREIK VKRQVFKVWM HNNKQAAKKK DL
101: CGEFMSSGEE GTVESLLCAA CDCHRSFHRK EIDGLFVVNF NSFGHSQRPL GSRHVSPIMM SFGGGGGCAA ESSTEDLNKF HQSFSGYGVD QFHHYQPKKR
201: FRTKFNEEQK EKMMEFAEKI GWRMTKLEDD EVNRFCREIK VKRQVFKVWM HNNKQAAKKK DL
Arabidopsis Description
ZHD6Zinc-finger homeodomain protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPW7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.