Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 2
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc05g018740.1.1 | Tomato | cytosol | 84.03 | 84.03 |
PGSC0003DMT400090846 | Potato | cytosol | 78.15 | 76.86 |
Solyc01g103810.1.1 | Tomato | cytosol | 71.43 | 73.28 |
Solyc01g103820.1.1 | Tomato | cytosol | 56.3 | 71.28 |
VIT_17s0000g06200.t01 | Wine grape | cytosol | 17.65 | 42.86 |
KRH01145 | Soybean | cytosol | 23.53 | 37.33 |
Solyc03g116070.1.1 | Tomato | mitochondrion | 22.69 | 32.53 |
Solyc03g061620.1.1 | Tomato | cytosol | 23.53 | 31.82 |
Zm00001d052395_P001 | Maize | plastid | 21.85 | 30.23 |
KRH40102 | Soybean | cytosol, mitochondrion | 18.49 | 30.14 |
EES16563 | Sorghum | cytosol | 22.69 | 29.35 |
KRH40101 | Soybean | mitochondrion | 22.69 | 27.84 |
EES07913 | Sorghum | cytosol | 22.69 | 27.55 |
Solyc02g067330.1.1 | Tomato | cytosol, nucleus, plastid | 23.53 | 27.45 |
KRH40100 | Soybean | mitochondrion | 21.85 | 27.08 |
TraesCS5A01G142700.1 | Wheat | cytosol | 21.01 | 26.6 |
TraesCS5B01G141400.1 | Wheat | cytosol | 21.01 | 26.6 |
TraesCS5D01G149400.1 | Wheat | cytosol | 21.01 | 26.6 |
HORVU5Hr1G045580.1 | Barley | cytosol | 21.01 | 26.6 |
Zm00001d023289_P001 | Maize | cytosol | 21.85 | 26.53 |
Zm00001d023286_P001 | Maize | cytosol | 21.85 | 26.53 |
Zm00001d044662_P001 | Maize | cytosol, plastid | 21.85 | 26.0 |
Os11t0128300-01 | Rice | cytosol, plastid | 22.69 | 25.71 |
Solyc02g087970.1.1 | Tomato | mitochondrion | 19.33 | 25.56 |
KRH01146 | Soybean | cytosol | 21.01 | 25.51 |
TraesCS3A01G448100.1 | Wheat | cytosol | 20.17 | 25.0 |
TraesCS3A01G448000.1 | Wheat | cytosol | 20.17 | 25.0 |
Os12t0124500-01 | Rice | cytosol, plastid | 21.85 | 24.76 |
TraesCS3B01G484100.1 | Wheat | cytosol | 19.33 | 23.96 |
Solyc05g051420.1.1 | Tomato | nucleus | 27.73 | 19.76 |
Solyc04g074990.2.1 | Tomato | nucleus | 23.53 | 19.58 |
HORVU3Hr1G096990.1 | Barley | cytosol | 15.97 | 19.19 |
Solyc03g098060.1.1 | Tomato | nucleus | 23.53 | 15.64 |
Solyc04g014260.1.1 | Tomato | nucleus | 31.09 | 14.98 |
Solyc04g080490.2.1 | Tomato | nucleus | 30.25 | 12.41 |
Solyc01g102980.2.1 | Tomato | nucleus | 30.25 | 12.41 |
Solyc02g067310.2.1 | Tomato | nucleus | 30.25 | 12.33 |
Solyc02g067320.1.1 | Tomato | nucleus | 30.25 | 10.88 |
Solyc05g007580.1.1 | Tomato | nucleus | 26.05 | 10.44 |
Solyc02g085160.1.1 | Tomato | nucleus | 25.21 | 10.24 |
Solyc09g089550.2.1 | Tomato | nucleus | 26.89 | 3.98 |
Protein Annotations
EnsemblPlants:Solyc05g020000.1.1 | EnsemblPlantsGene:Solyc05g020000.1 | InterPro:IPR006456 | InterPro:ZF_HD_homeobox_Cys/His_dimer | PANTHER:PTHR31948 | PANTHER:PTHR31948:SF7 |
PFAM:PD125774 | PFAM:PF04770 | PFscan:PS51523 | UniParc:UPI00027656A9 | UniProt:K4BZF2 | MapMan:15.5.3.13 |
Description
No Description!
Coordinates
chr5:-:25503046..25503405
Molecular Weight (calculated)
13703.3 Da
IEP (calculated)
9.585
GRAVY (calculated)
-0.510
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MTNSSNSNPS GDMTIKYGIY LKNHATNFGD YSVDGCREFV KKGYGGTKEA YICANCGCLR RFHRMNSHSL YPPPILRSHF FHLHVHPHGG ENAPIISHPF
101: MSQFVSIQYI RRPVFYNYR
101: MSQFVSIQYI RRPVFYNYR
001: MMKKRQMVIK QRSRNSNTSS SWTTTSSSSS SSEISNVRYV ECQKNHAANI GGYAVDGCRE FMAAGVEGTV DALRCAACGC HRNFHRKEVD TEVVCEYSPP
101: NA
101: NA
Arabidopsis Description
MIF1Mini zinc finger protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA51]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.