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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc05g018740.1.1 Tomato cytosol 84.03 84.03
PGSC0003DMT400090846 Potato cytosol 78.15 76.86
Solyc01g103810.1.1 Tomato cytosol 71.43 73.28
Solyc01g103820.1.1 Tomato cytosol 56.3 71.28
VIT_17s0000g06200.t01 Wine grape cytosol 17.65 42.86
KRH01145 Soybean cytosol 23.53 37.33
Solyc03g116070.1.1 Tomato mitochondrion 22.69 32.53
Solyc03g061620.1.1 Tomato cytosol 23.53 31.82
Zm00001d052395_P001 Maize plastid 21.85 30.23
KRH40102 Soybean cytosol, mitochondrion 18.49 30.14
EES16563 Sorghum cytosol 22.69 29.35
KRH40101 Soybean mitochondrion 22.69 27.84
EES07913 Sorghum cytosol 22.69 27.55
Solyc02g067330.1.1 Tomato cytosol, nucleus, plastid 23.53 27.45
KRH40100 Soybean mitochondrion 21.85 27.08
TraesCS5A01G142700.1 Wheat cytosol 21.01 26.6
TraesCS5B01G141400.1 Wheat cytosol 21.01 26.6
TraesCS5D01G149400.1 Wheat cytosol 21.01 26.6
HORVU5Hr1G045580.1 Barley cytosol 21.01 26.6
Zm00001d023289_P001 Maize cytosol 21.85 26.53
Zm00001d023286_P001 Maize cytosol 21.85 26.53
Zm00001d044662_P001 Maize cytosol, plastid 21.85 26.0
Os11t0128300-01 Rice cytosol, plastid 22.69 25.71
Solyc02g087970.1.1 Tomato mitochondrion 19.33 25.56
KRH01146 Soybean cytosol 21.01 25.51
TraesCS3A01G448100.1 Wheat cytosol 20.17 25.0
TraesCS3A01G448000.1 Wheat cytosol 20.17 25.0
Os12t0124500-01 Rice cytosol, plastid 21.85 24.76
TraesCS3B01G484100.1 Wheat cytosol 19.33 23.96
Solyc05g051420.1.1 Tomato nucleus 27.73 19.76
Solyc04g074990.2.1 Tomato nucleus 23.53 19.58
HORVU3Hr1G096990.1 Barley cytosol 15.97 19.19
Solyc03g098060.1.1 Tomato nucleus 23.53 15.64
Solyc04g014260.1.1 Tomato nucleus 31.09 14.98
Solyc04g080490.2.1 Tomato nucleus 30.25 12.41
Solyc01g102980.2.1 Tomato nucleus 30.25 12.41
Solyc02g067310.2.1 Tomato nucleus 30.25 12.33
Solyc02g067320.1.1 Tomato nucleus 30.25 10.88
Solyc05g007580.1.1 Tomato nucleus 26.05 10.44
Solyc02g085160.1.1 Tomato nucleus 25.21 10.24
Solyc09g089550.2.1 Tomato nucleus 26.89 3.98
Protein Annotations
EnsemblPlants:Solyc05g020000.1.1EnsemblPlantsGene:Solyc05g020000.1InterPro:IPR006456InterPro:ZF_HD_homeobox_Cys/His_dimerPANTHER:PTHR31948PANTHER:PTHR31948:SF7
PFAM:PD125774PFAM:PF04770PFscan:PS51523UniParc:UPI00027656A9UniProt:K4BZF2MapMan:15.5.3.13
Description
No Description!
Coordinates
chr5:-:25503046..25503405
Molecular Weight (calculated)
13703.3 Da
IEP (calculated)
9.585
GRAVY (calculated)
-0.510
Length
119 amino acids
Sequence
(BLAST)
001: MTNSSNSNPS GDMTIKYGIY LKNHATNFGD YSVDGCREFV KKGYGGTKEA YICANCGCLR RFHRMNSHSL YPPPILRSHF FHLHVHPHGG ENAPIISHPF
101: MSQFVSIQYI RRPVFYNYR
Best Arabidopsis Sequence Match ( AT1G74660.1 )
(BLAST)
001: MMKKRQMVIK QRSRNSNTSS SWTTTSSSSS SSEISNVRYV ECQKNHAANI GGYAVDGCRE FMAAGVEGTV DALRCAACGC HRNFHRKEVD TEVVCEYSPP
101: NA
Arabidopsis Description
MIF1Mini zinc finger protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA51]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.