Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G045580.1 | Barley | cytosol | 100.0 | 100.0 |
| TraesCS5B01G141400.1 | Wheat | cytosol | 100.0 | 100.0 |
| TraesCS5A01G142700.1 | Wheat | cytosol | 98.94 | 98.94 |
| EES16563 | Sorghum | cytosol | 70.21 | 71.74 |
| Os12t0124500-01 | Rice | cytosol, plastid | 74.47 | 66.67 |
| EES07913 | Sorghum | cytosol | 69.15 | 66.33 |
| Zm00001d023286_P001 | Maize | cytosol | 65.96 | 63.27 |
| VIT_17s0000g06200.t01 | Wine grape | cytosol | 32.98 | 63.27 |
| Zm00001d023289_P001 | Maize | cytosol | 64.89 | 62.24 |
| Zm00001d044662_P001 | Maize | cytosol, plastid | 61.7 | 58.0 |
| KRH01145 | Soybean | cytosol | 37.23 | 46.67 |
| KRH40102 | Soybean | cytosol, mitochondrion | 35.11 | 45.21 |
| TraesCS5D01G234700.1 | Wheat | mitochondrion | 44.68 | 45.16 |
| KRH40101 | Soybean | mitochondrion | 39.36 | 38.14 |
| KRH01146 | Soybean | cytosol | 39.36 | 37.76 |
| KRH40100 | Soybean | mitochondrion | 37.23 | 36.46 |
| Solyc01g103820.1.1 | Tomato | cytosol | 26.6 | 26.6 |
| Solyc05g018740.1.1 | Tomato | cytosol | 28.72 | 22.69 |
| Solyc01g103810.1.1 | Tomato | cytosol | 27.66 | 22.41 |
| PGSC0003DMT400086860 | Potato | cytosol | 27.66 | 21.85 |
| PGSC0003DMT400090846 | Potato | cytosol | 27.66 | 21.49 |
| Solyc05g020000.1.1 | Tomato | cytosol | 26.6 | 21.01 |
| TraesCS1D01G426300.1 | Wheat | nucleus | 39.36 | 14.8 |
| TraesCS1D01G064300.1 | Wheat | mitochondrion | 25.53 | 13.87 |
| TraesCS3D01G224100.1 | Wheat | nucleus | 34.04 | 13.56 |
| TraesCS5D01G253100.1 | Wheat | nucleus | 38.3 | 12.16 |
| TraesCS2D01G303900.1 | Wheat | nucleus | 32.98 | 10.58 |
| TraesCS4D01G086300.1 | Wheat | nucleus | 37.23 | 9.0 |
| TraesCS6D01G253700.1 | Wheat | nucleus | 39.36 | 7.96 |
| TraesCS5D01G234600.1 | Wheat | nucleus | 31.91 | 7.75 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G149400.1 | EnsemblPlantsGene:TraesCS5D01G149400 | InterPro:IPR006456 | InterPro:ZF_HD_homeobox_Cys/His_dimer | PANTHER:PTHR31948 | PANTHER:PTHR31948:SF45 |
| PFAM:PD125774 | PFAM:PF04770 | PFscan:PS51523 | SEG:seg | TIGRFAMs:TIGR01566 | MapMan:15.5.3.13 |
Description
No Description!
Coordinates
chr5D:+:238383001..238383285
Molecular Weight (calculated)
9842.5 Da
IEP (calculated)
7.340
GRAVY (calculated)
-0.478
Length
94 amino acids
Sequence
(BLAST)
(BLAST)
1: MGPQQDRSAS KALANGTAVA PERKDGKVVH YKECQRNHAA GIGGYAVDGC REFMASAPAG AEALLCAACG CHRSFHKREV EAVDCDCSSD TSGR
1: MRKRQVVLRR ASPEEPSRSS STASSLTVRT VRYGECQKNH AAAVGGYAVD GCREFMASRG EEGTVAALTC AACGCHRSFH RREIETEVVC DCNSPPSTGN
Arabidopsis Description
MIF2Mini zinc finger protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJW5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.