Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G322200.1 | Wheat | nucleus | 95.89 | 95.56 |
| TraesCS2D01G303900.1 | Wheat | nucleus | 95.89 | 95.56 |
| TraesCS2A01G305400.1 | Wheat | nucleus | 95.55 | 94.58 |
| Os04t0434500-00 | Rice | nucleus | 72.26 | 74.3 |
| Zm00001d003645_P001 | Maize | nucleus | 70.89 | 69.0 |
| HORVU4Hr1G008360.1 | Barley | cytosol, mitochondrion, nucleus | 27.74 | 33.75 |
| HORVU1Hr1G013140.1 | Barley | cytosol | 8.56 | 33.33 |
| HORVU5Hr1G045580.1 | Barley | cytosol | 10.62 | 32.98 |
| HORVU1Hr1G091470.1 | Barley | nucleus | 26.37 | 32.77 |
| HORVU3Hr1G096990.1 | Barley | cytosol | 10.62 | 31.31 |
| HORVU5Hr1G069730.1 | Barley | nucleus | 30.14 | 29.14 |
| HORVU5Hr1G065740.1 | Barley | nucleus | 29.11 | 22.02 |
| HORVU4Hr1G015250.6 | Barley | nucleus, plastid | 30.82 | 21.43 |
| HORVU6Hr1G069090.1 | Barley | nucleus | 26.71 | 16.92 |
| HORVU6Hr1G069070.1 | Barley | plastid | 10.27 | 10.68 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.13 | UniProt:A0A287IHU4 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | EnsemblPlantsGene:HORVU2Hr1G075950 | EnsemblPlants:HORVU2Hr1G075950.1 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:Homeodomain_ZF_HD |
| InterPro:IPR001356 | InterPro:IPR006456 | PFAM:PD125774 | PFAM:PF04770 | PFscan:PS51523 | PANTHER:PTHR31948 |
| PANTHER:PTHR31948:SF18 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01565 | TIGRFAMs:TIGR01566 | UniParc:UPI000B473555 | InterPro:ZF_HD_homeobox_Cys/His_dimer |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:547420245..547421743
Molecular Weight (calculated)
30140.6 Da
IEP (calculated)
7.821
GRAVY (calculated)
-0.462
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MMDHLSLVPY EGGSGAGGDA GAKYKECMRN HAAAMGGQAF DGCGEYMPAS PDSLKCAACG CHRSFHRRAG SLTGGACPPP FFFSPPPPPS HHHPPPHHAV
101: LQGFLPSAPP RPPQLALPYH AVPAAWHHAL LDPARAGSET PPRADDCSPG CGSGSFGRKR HRTKFTPEQK ERMRAFAEKQ GWRINRDDGG ALERFCLEIG
201: VKRNVLKVWM HNHKHQLASP TSPAAGIGMG MGMGMGIGIN PGALGTSAGA GAGAGAGVGV GAGTGDGDDD DTDDDSPPRA AVSSPSPSPI SV
101: LQGFLPSAPP RPPQLALPYH AVPAAWHHAL LDPARAGSET PPRADDCSPG CGSGSFGRKR HRTKFTPEQK ERMRAFAEKQ GWRINRDDGG ALERFCLEIG
201: VKRNVLKVWM HNHKHQLASP TSPAAGIGMG MGMGMGIGIN PGALGTSAGA GAGAGAGVGV GAGTGDGDDD DTDDDSPPRA AVSSPSPSPI SV
001: MDLSSKPQQQ LLNSLPIAGE LTVTGEMGVC YKECLKNHAA NLGGHALDGC GEFMPSPTAT STDPSSLRCA ACGCHRNFHR RDPSENLNFL TAPPISSPSG
101: TESPPSRHVS SPVPCSYYTS APPHHVILSL SSGFPGPSDQ DPTVVRSENS SRGAMRKRTR TKFTPEQKIK MRAFAEKAGW KINGCDEKSV REFCNEVGIE
201: RGVLKVWMHN NKYSLLNGKI REIEHGLCLN THSNDGDGSS SS
101: TESPPSRHVS SPVPCSYYTS APPHHVILSL SSGFPGPSDQ DPTVVRSENS SRGAMRKRTR TKFTPEQKIK MRAFAEKAGW KINGCDEKSV REFCNEVGIE
201: RGVLKVWMHN NKYSLLNGKI REIEHGLCLN THSNDGDGSS SS
Arabidopsis Description
ZHD11Zinc-finger homeodomain protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SEZ1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.