Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G303900.1 | Wheat | nucleus | 98.63 | 98.63 |
| TraesCS2A01G305400.1 | Wheat | nucleus | 97.95 | 97.29 |
| HORVU2Hr1G075950.1 | Barley | nucleus | 95.56 | 95.89 |
| Os04t0434500-00 | Rice | nucleus | 73.72 | 76.06 |
| Zm00001d003645_P001 | Maize | nucleus | 72.35 | 70.67 |
| TraesCS3B01G258400.1 | Wheat | nucleus | 27.65 | 34.91 |
| TraesCS4B01G050800.1 | Wheat | cytosol, mitochondrion, nucleus | 27.99 | 34.75 |
| TraesCS3B01G484100.1 | Wheat | cytosol | 11.26 | 34.38 |
| TraesCS5B01G226000.1 | Wheat | mitochondrion | 10.58 | 33.33 |
| TraesCS5B01G141400.1 | Wheat | cytosol | 10.58 | 32.98 |
| TraesCS1B01G448600.1 | Wheat | nucleus | 25.94 | 30.16 |
| TraesCS5B01G243800.1 | Wheat | nucleus | 30.38 | 29.97 |
| TraesCS1B01G106800.1 | Wheat | nucleus | 26.28 | 26.55 |
| TraesCS4B01G089700.1 | Wheat | nucleus | 29.69 | 21.91 |
| TraesCS5B01G225700.1 | Wheat | nucleus | 29.01 | 21.79 |
| TraesCS6B01G301000.1 | Wheat | nucleus | 29.69 | 18.87 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.13 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:Homeodomain_ZF_HD | InterPro:IPR001356 | InterPro:IPR006456 | PFAM:PD125774 |
| PFAM:PF04770 | PFscan:PS51523 | PANTHER:PTHR31948 | PANTHER:PTHR31948:SF18 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01565 |
| TIGRFAMs:TIGR01566 | EnsemblPlantsGene:TraesCS2B01G322200 | EnsemblPlants:TraesCS2B01G322200.1 | InterPro:ZF_HD_homeobox_Cys/His_dimer | TIGR:cd00086 | SEG:seg |
Description
No Description!
Coordinates
chr2B:-:460550781..460551662
Molecular Weight (calculated)
30321.8 Da
IEP (calculated)
7.614
GRAVY (calculated)
-0.483
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MMDHLSLVPY EGGSGAGGDA GAKYKECMRN HAAAMGGQAF DGCGEYMPAS PDSLKCAACG CHRSFHRRAG SLTGGACPAP FFFSPPPPPP PHHHPPPHHP
101: VLQGFLPSAP PRPPQLALPY HAVPAAWHHA LLDPARAGSE TPPRADDCSP GCGSGSFGRK RHRTKFTPEQ KERMRAFAEK QGWRINRDDG GALERFCLEI
201: GVKRNVLKVW MHNHKHQLAS PTSTAAGIGM GMGMGIGINP GVLGTGTGTG AGAGVGVGVG AGTGDGDGDD DDTDDDSPPR AAVSSPSPSP ISV
101: VLQGFLPSAP PRPPQLALPY HAVPAAWHHA LLDPARAGSE TPPRADDCSP GCGSGSFGRK RHRTKFTPEQ KERMRAFAEK QGWRINRDDG GALERFCLEI
201: GVKRNVLKVW MHNHKHQLAS PTSTAAGIGM GMGMGIGINP GVLGTGTGTG AGAGVGVGVG AGTGDGDGDD DDTDDDSPPR AAVSSPSPSP ISV
001: MDLSSKPQQQ LLNSLPIAGE LTVTGEMGVC YKECLKNHAA NLGGHALDGC GEFMPSPTAT STDPSSLRCA ACGCHRNFHR RDPSENLNFL TAPPISSPSG
101: TESPPSRHVS SPVPCSYYTS APPHHVILSL SSGFPGPSDQ DPTVVRSENS SRGAMRKRTR TKFTPEQKIK MRAFAEKAGW KINGCDEKSV REFCNEVGIE
201: RGVLKVWMHN NKYSLLNGKI REIEHGLCLN THSNDGDGSS SS
101: TESPPSRHVS SPVPCSYYTS APPHHVILSL SSGFPGPSDQ DPTVVRSENS SRGAMRKRTR TKFTPEQKIK MRAFAEKAGW KINGCDEKSV REFCNEVGIE
201: RGVLKVWMHN NKYSLLNGKI REIEHGLCLN THSNDGDGSS SS
Arabidopsis Description
ZHD11Zinc-finger homeodomain protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SEZ1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.