Factsheet for Os04t0434500-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
endoplasmic reticulum 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003645_P001	Maize	nucleus	80.63	76.33
TraesCS2B01G322200.1	Wheat	nucleus	76.06	73.72
TraesCS2D01G303900.1	Wheat	nucleus	75.7	73.38
TraesCS2A01G305400.1	Wheat	nucleus	75.35	72.54
HORVU2Hr1G075950.1	Barley	nucleus	74.3	72.26
Os08t0438100-01	Rice	cytosol	11.27	34.41
Os03t0718500-00	Rice	mitochondrion, nucleus, peroxisome	27.82	33.19
Os05t0579300-01	Rice	nucleus	28.87	32.16
Os01t0635550-00	Rice	nucleus	26.06	31.9
Os11t0128300-01	Rice	cytosol, plastid	11.62	31.43
Os08t0479400-01	Rice	nucleus	32.04	31.38
Os09t0414600-02	Rice	nucleus	11.97	31.19
Os09t0466400-01	Rice	nucleus	30.63	31.18
Os12t0124500-01	Rice	cytosol, plastid	11.27	30.48
Os12t0208900-00	Rice	nucleus	22.89	29.28
Os08t0438400-01	Rice	plastid	29.23	24.56
Os11t0243300-01	Rice	cytosol, mitochondrion, nucleus, plastid	33.1	22.54
Os02t0706600-00	Rice	nucleus	32.04	21.31

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.13	EntrezGene:4335893	UniProt:A0A0P0WAN4	ProteinID:BAS89293.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0046872	InterPro:Homeobox-like_sf	InterPro:Homeodomain_ZF_HD	InterPro:IPR006456
EnsemblPlantsGene:Os04g0434500	EnsemblPlants:Os04t0434500-00	PFAM:PD125774	PFAM:PF04770	PFscan:PS51523	PANTHER:PTHR31948
PANTHER:PTHR31948:SF18	SUPFAM:SSF46689	TIGRFAMs:TIGR01565	TIGRFAMs:TIGR01566	UniParc:UPI00005B0CFD	RefSeq:XP_015635194.1
InterPro:ZF_HD_homeobox_Cys/His_dimer	SEG:seg	:	:	:	:

Description

zinc finger homeodomain class homeobox transcription factor 8Homeodomain-related domain containing protein. (Os04t0434500-00)

Coordinates

chr4:-:21600673..21601888

Molecular Weight (calculated)

29045.1 Da

IEP (calculated)

8.175

GRAVY (calculated)

-0.446

Length

284 amino acids

Sequence
(BLAST)

001: MMDHLSLVPY EGGSAGGGGG GGKYKECMRN HAAAMGGQAF DGCGEYMPAS PDSLKCAACG CHRSFHRRAA AGIGGGPVFF RPPPPPQPHS HHAALQGFLP
101: SSVPAPAPPP QLALPYHAVP AAAWHHAAAA AAGRAGSETP PRMDDFGPGS AGGSGSGGGG IFGRKRFRTK FTPEQKERMR EFAEKQGWRI NRNDDGALDR
201: FCVEIGVKRH VLKVWMHNHK NQLASSPTSA AAAAAGVMNP GAGIGLGTGL GTGISGDGDG DDDDTDDSPP RAAVSSPSPS PISV

Best Arabidopsis Sequence Match ( AT1G14440.1 )
(BLAST)

001: MEIASQEDHD MPIPLNTTFG GGGSHGHMIH HHDHHAANSA PPTHNNNNTT QPPPMPLHGN GHGNNYDHHH HQDPHHVGYN AIIKKPMIKY KECLKNHAAA
101: MGGNATDGCG EFMPSGEDGS IEALTCSACN CHRNFHRKEV EGELAATAMS PYHQHPPHRK LMLNHQKIRS AMPHQMIMPI GVSNYRYMHN NSESEDFMEE
201: DGVTTASRSL PNLPYNQKKR FRTKFTPEQK EKMLSFAEKV GWKIQRQEDC VVQRFCEEIG VKRRVLKVWM HNNKIHFSKK NNINLEDNDN EKINNLNNVD
301: LSGNNDMTKI VP

Arabidopsis Description

ZHD4Zinc-finger homeodomain protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9S0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.