Factsheet for Os08t0438400-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
mitochondrion 2
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0635550-00
Os02t0706600-00
Os03t0120400-01
Os05t0579300-01
Os08t0438400-01
Os08t0479400-01
Os09t0414600-02
Os09t0466400-01
Os10t0537400-00
Os11t0243300-01
Os12t0208900-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G15210.1	Os11t0243300-01	AT1G14440.1	16428600
AT5G15210.1	Os12t0208900-00	AT1G14440.1	16428600
AT5G15210.1	Os01t0635550-00	AT1G75240.1	16428600
AT5G15210.1	Os02t0706600-00	AT1G75240.1	16428600
AT5G15210.1	Os05t0579300-01	AT1G75240.1	16428600
AT5G15210.1	Os03t0120400-01	AT2G18196.1	18974936
AT5G15210.1	Os10t0537400-00	AT2G18196.1	18974936
AT5G15210.1	Os01t0635550-00	AT3G50890.1	16428600
AT5G15210.1	Os02t0706600-00	AT3G50890.1	16428600
AT5G15210.1	Os05t0579300-01	AT3G50890.1	16428600
AT5G15210.1	Os08t0438400-01	AT5G15210.1	16428600
AT5G15210.1	Os09t0414600-02	AT5G15210.1	16428600
AT5G15210.1	Os08t0438400-01	AT5G15210.1	21245844
AT5G15210.1	Os09t0414600-02	AT5G15210.1	21245844
AT5G15210.1	Os08t0479400-01	AT5G65410.1	16428600
AT5G15210.1	Os09t0466400-01	AT5G65410.1	16428600

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0414600-02	Rice	nucleus	20.71	64.22
GSMUA_Achr6P02700_001	Banana	nucleus	33.73	47.9
AT5G15210.1	Thale cress	nucleus	34.32	42.8
GSMUA_Achr10P...	Banana	nucleus	32.84	42.53
VIT_01s0026g02460.t01	Wine grape	nucleus	27.51	40.43
Bra008712.1-P	Field mustard	cytosol	31.36	40.3
CDX69541	Canola	nucleus	31.07	39.92
PGSC0003DMT400080288	Potato	nucleus	33.14	39.02
Solyc05g007580.1.1	Tomato	nucleus	33.43	38.05
CDX85059	Canola	nucleus	26.04	36.97
Os12t0124500-01	Rice	cytosol, plastid	11.24	36.19
Os11t0128300-01	Rice	cytosol, plastid	11.24	36.19
KRH70724	Soybean	nucleus	30.18	35.05
Os05t0579300-01	Rice	nucleus	26.33	34.9
KRH74865	Soybean	nucleus	30.47	34.8
Os08t0438100-01	Rice	cytosol	9.17	33.33
Os01t0635550-00	Rice	nucleus	22.49	32.76
KRG89637	Soybean	nucleus	17.46	32.42
KRH50585	Soybean	nucleus	32.84	31.01
Os03t0718500-00	Rice	mitochondrion, nucleus, peroxisome	21.3	30.25
Os09t0466400-01	Rice	nucleus	24.56	29.75
Os08t0479400-01	Rice	nucleus	25.15	29.31
Os04t0434500-00	Rice	nucleus	24.56	29.23
Os12t0208900-00	Rice	nucleus	14.2	21.62
Os11t0243300-01	Rice	cytosol, mitochondrion, nucleus, plastid	26.63	21.58
Os02t0706600-00	Rice	nucleus	26.04	20.61

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.13	EntrezGene:4345673	UniProt:A0A0P0XGE2	ProteinID:BAT05605.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0046872	InterPro:Homeobox-like_sf	InterPro:Homeodomain_ZF_HD	InterPro:IPR006456
EnsemblPlantsGene:Os08g0438400	EnsemblPlants:Os08t0438400-01	PFAM:PD125774	PFAM:PF04770	PFscan:PS51523	PANTHER:PTHR31948
PANTHER:PTHR31948:SF48	SUPFAM:SSF101447	SUPFAM:SSF46689	TIGRFAMs:TIGR01565	TIGRFAMs:TIGR01566	UniParc:UPI000393C37E
RefSeq:XP_015648556.1	InterPro:ZF_HD_homeobox_Cys/His_dimer	SEG:seg	:	:	:

Description

Similar to ZF-HD homeobox protein. (Os08t0438400-01)

Coordinates

chr8:-:21307601..21309069

Molecular Weight (calculated)

35250.5 Da

IEP (calculated)

8.115

GRAVY (calculated)

-0.491

Length

338 amino acids

Sequence
(BLAST)

001: MEAVVGVKYR PVVFPNGGAA AAAAGKSKAT PASATAAVYR ECLKNHAASL GGHAVDGCGE FMPSPAADAA DPASLKCAAC GCHRNFHRRL PEAPPSPPLL
101: ALPPPPPPPP PPPPPPQPQQ HLPRTAAVAV APQLLLHGSH QRREQSPETD RVRGPGHHHD DDAAADDDDS EDSEMSDYDD DRSASPLQAP PPVLSPGYLP
201: SATHMLLSLG SASAPAVAAS RPHAAAAAMG PPPPPGAATS ASRKRFRTKF SPEQKQRMQA LSERLGWRLQ KRDEAVVDEC CREIGVGKGV FKVWMHNNKH
301: NFLGGHSARR SAAAAAAAPL APPPVLTDFS INGSPQST

Best Arabidopsis Sequence Match ( AT5G15210.1 )
(BLAST)

001: MDVIATTTTI VSDLDSRQPE IEAPIRIQPA KPISFSNGKR CHHHHLASEA VAVATYKECL KNHAAGIGGH ALDGCGEFMP SPSFNSNDPA SLTCAACGCH
101: RNFHRREEDP SSLSAIVPAI EFRPHNRHQL PPPPPPHLAG IRSPDDDDSA SPPPISSSYM LLALSGGRGG ANTAVPMSRK RFRTKFSQYQ KEKMFEFSER
201: VGWRMPKADD VVVKEFCREI GVDKSVFKVW MHNNKISGRS GARRANGGVV VGGVGDSRQS VVPTNGSFSS T

Arabidopsis Description

ZHD8Zinc-finger homeodomain protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXG0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.